Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 RN7SKP15-201ENST00000364742 309 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AL589993.1-201ENST00000407450 2524 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 RNA5SP115-201ENST00000411160 107 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 PTP4A1P3-201ENST00000433661 420 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AL645931.1-201ENST00000439737 410 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 PFN1P11-201ENST00000445829 389 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AC007383.1-201ENST00000445875 636 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 MTND2P6-201ENST00000455337 1030 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 ZNF812P-201ENST00000457674 1694 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AC083906.1-201ENST00000509298 406 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AC093770.1-201ENST00000511559 571 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AP000662.1-201ENST00000530952 487 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 UBTFL9-201ENST00000534504 1148 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 YWHAZP1-201ENST00000556286 722 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AC037479.1-201ENST00000558361 625 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AC110597.1-201ENST00000562669 3176 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 CD24P2-201ENST00000565486 219 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 OR1E3-201ENST00000575608 948 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AL953862.2-201ENST00000603089 820 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AC011891.2-201ENST00000604949 397 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AC005393.1-201ENST00000617916 584 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AL445528.2-201ENST00000620582 470 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AC095038.2-201ENST00000621464 1070 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AL450226.2-201ENST00000622913 439 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AC111152.1-202ENST00000635848 339 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 AC074141.1-201ENST00000588129 2995 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC241584.2-201ENST00000637142 2090 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC009120.2-204ENST00000621548 2032 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 OR7A2P-201ENST00000304105 930 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 MIR122-201ENST00000385044 85 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 RPL12P23-201ENST00000405880 490 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 MTCO2P17-201ENST00000424336 677 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 OR6R1P-201ENST00000431838 940 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 ARMC4P1-201ENST00000438905 707 ntBASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB1Q9Y5F3 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 399.7 ms