Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 Z95114.1-201ENST00000624264 14574 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 RNA5SP333-201ENST00000363466 118 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 RNA5SP334-201ENST00000364825 118 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 RN7SKP269-201ENST00000365545 319 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 OSTCP4-201ENST00000424397 449 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 AC115283.1-201ENST00000427353 400 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 AL389925.1-201ENST00000432257 728 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 IGLV3-4-201ENST00000432300 244 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 HMGN1P2-201ENST00000445197 310 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 PPP1R11P1-201ENST00000486095 376 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 AC063943.2-201ENST00000495697 534 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 AL049874.4-201ENST00000557593 255 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 AC124916.2-201ENST00000604416 224 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 RN7SL261P-201ENST00000613441 282 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 AC131009.3-201ENST00000621809 287 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 AC021766.1-201ENST00000624404 741 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 AC083899.2-201ENST00000423285 1376 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
SSX2IPQ9Y2D8 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 CLCA3P-203ENST00000490028 2781 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 MTCO1P25-201ENST00000414449 1799 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AC110597.1-201ENST00000562669 3176 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AP000568.1-201ENST00000282964 442 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 MIR541-201ENST00000401360 84 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 RPL5P20-201ENST00000403848 896 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 GCNT1P4-201ENST00000404096 329 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 RPL23AP18-201ENST00000416139 468 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AC003989.1-201ENST00000434569 565 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 MTND4P15-201ENST00000437913 1033 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 NDUFA5P5-201ENST00000468361 342 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AC094085.1-201ENST00000468914 584 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AC128716.1-201ENST00000475129 166 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AC092375.1-201ENST00000550410 637 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AC025171.4-201ENST00000607250 1047 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AC018690.1-201ENST00000608144 626 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AP001962.1-201ENST00000624114 559 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AC004808.2-201ENST00000627965 773 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AC022613.3-201ENST00000560740 1346 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms