Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL592114.1-201ENST00000403842 483 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AL590617.1-201ENST00000405630 748 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 MIR1306-201ENST00000408439 85 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 RNU6-985P-201ENST00000410182 104 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 RN7SKP85-201ENST00000411349 318 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 RPL7L1P12-201ENST00000417594 729 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AC004006.1-201ENST00000434994 377 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 CACYBPP1-201ENST00000438592 684 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 TCEA1P1-201ENST00000449716 880 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AC099681.1-201ENST00000454777 552 ntTSL 4 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 UGT2A3P7-201ENST00000510485 734 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AC021146.1-201ENST00000511202 716 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AC226119.2-201ENST00000513501 530 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 ALG1L12P-201ENST00000515046 434 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 BTF3P12-201ENST00000519620 469 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AC010834.2-201ENST00000523945 530 ntTSL 3 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 OR5M4P-201ENST00000529436 925 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 OR6M3P-201ENST00000531567 700 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 SCAND2P-204ENST00000541103 669 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 SLC25A3P2-201ENST00000547720 880 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 HIGD1AP9-201ENST00000550710 279 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 HIF1A-AS2-201ENST00000554254 533 ntTSL 3 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 SCOCP1-201ENST00000554676 349 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AC008782.1-201ENST00000603386 430 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AC007938.3-201ENST00000604965 623 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AL591926.6-201ENST00000617375 415 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 CU639417.5-201ENST00000623983 476 ntTSL 3 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 CCR6-203ENST00000400926 3216 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AC092725.2-201ENST00000567658 1389 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 ZNF300P1-201ENST00000356555 1822 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AL592429.1-201ENST00000403909 1473 ntBASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 ZNF410-224ENST00000615736 1551 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS9D1Q9Y2B5 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 ANKUB1-201ENST00000446160 2419 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 XRCC6P4-201ENST00000518193 2067 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 VPS11-206ENST00000614944 3388 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 RN7SKP204-201ENST00000365481 310 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 RNU6-723P-201ENST00000383973 107 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 EI24P3-201ENST00000399046 1062 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 CNN2P7-201ENST00000400583 932 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 CCNYL3-201ENST00000407030 998 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AL513302.1-201ENST00000415679 428 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 ZRANB2-AS2-203ENST00000415780 249 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 BTF3P9-201ENST00000418784 283 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC008267.5-201ENST00000424928 265 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC009965.2-201ENST00000425328 970 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC011998.2-201ENST00000430884 473 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 YWHAEP5-201ENST00000431545 765 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 CYP4F25P-201ENST00000446871 520 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC132479.1-201ENST00000449160 144 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 TSSK1A-201ENST00000450724 768 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 OR11Q1P-201ENST00000451582 877 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 YWHAEP1-201ENST00000453697 763 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC026798.1-201ENST00000468490 482 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 MTND4P17-201ENST00000470444 350 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AL355312.3-201ENST00000472053 312 ntTSL 3 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AP001318.1-201ENST00000476981 321 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 GAPDHP39-201ENST00000481866 979 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms