Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AC004656.1-201ENST00000568479 4951 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 OR52N3P-201ENST00000413417 934 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AC092646.1-201ENST00000427142 901 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AL645939.3-201ENST00000435408 225 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 RPSAP41-201ENST00000439695 860 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 GTF2IP14-201ENST00000441415 586 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 GAPDHP37-201ENST00000442317 968 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 FRG2FP-204ENST00000453982 852 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 RPL12P39-201ENST00000455456 496 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 RN7SL352P-201ENST00000466002 277 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AL079303.1-201ENST00000486611 463 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AC111000.6-201ENST00000514471 709 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AP004607.5-201ENST00000532034 217 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AC090286.3-201ENST00000573133 187 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 RN7SL657P-201ENST00000582431 293 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AC006115.2-201ENST00000596823 202 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 Z93930.3-201ENST00000607919 749 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AC005899.7-201ENST00000618199 588 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AC005618.4-201ENST00000625053 554 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.72□□□□□ -1.49
RIMS3Q9UJD0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.71□□□□□ -1.49
RIMS3Q9UJD0 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RIMS3Q9UJD0 AC011416.1-201ENST00000514947 1732 ntBASIC5.71□□□□□ -1.49
RIMS3Q9UJD0 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.71□□□□□ -1.49
RIMS3Q9UJD0 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 RN7SKP185-201ENST00000362813 326 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 RN7SKP81-201ENST00000365603 331 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 NFU1P1-201ENST00000413128 774 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 CUBNP2-201ENST00000443534 1139 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 RPS23P9-201ENST00000448848 438 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 RPL23AP60-201ENST00000450011 454 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 RBMY2BP-202ENST00000451071 1156 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 RPL36AP55-201ENST00000454114 305 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 RN7SL83P-201ENST00000468131 297 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 DEFB109A-201ENST00000482450 265 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 RPSAP51-201ENST00000497462 645 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 RNA5SP418-201ENST00000515951 117 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 SNORA70.11-201ENST00000515987 138 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 SNORA70.13-201ENST00000516116 138 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 OR9G2P-201ENST00000533326 880 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 AC092865.1-201ENST00000544395 1023 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 AC090826.1-203ENST00000569235 490 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 AC068408.1-201ENST00000577406 1144 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms