Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
USP35Q9P2H5 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 AC073365.1-203ENST00000641055 1992 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
USP35Q9P2H5 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 SNORA27.3-201ENST00000364937 134 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 MRPS6P2-201ENST00000381143 370 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 RPL7AP14-201ENST00000424041 802 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 HLA-DPA3-207ENST00000454398 229 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 AL049829.1-201ENST00000465411 156 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 STRADBP1-201ENST00000478954 1281 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 RPS10P20-201ENST00000494130 463 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 AC108157.1-201ENST00000510511 539 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 AC011352.2-201ENST00000514574 1016 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 AL121839.1-201ENST00000556233 1185 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 AC004805.3-201ENST00000603178 310 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 AC073575.2-201ENST00000614212 627 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 AC093225.1-201ENST00000506867 1408 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
USP35Q9P2H5 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
USP35Q9P2H5 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
USP35Q9P2H5 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
USP35Q9P2H5 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
USP35Q9P2H5 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
USP35Q9P2H5 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
USP35Q9P2H5 SMG1P5-202ENST00000529428 4219 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 SMG1P2-201ENST00000566127 4221 ntBASIC8.85□□□□□ -0.99
USP35Q9P2H5 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
USP35Q9P2H5 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
USP35Q9P2H5 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
USP35Q9P2H5 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
USP35Q9P2H5 RNU4-39P-201ENST00000362455 127 ntBASIC8.84□□□□□ -0.99
USP35Q9P2H5 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 RN7SKP232-201ENST00000410170 290 ntBASIC8.84□□□□□ -0.99
USP35Q9P2H5 CDY17P-201ENST00000414121 1282 ntBASIC8.84□□□□□ -0.99
USP35Q9P2H5 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 CDY8P-201ENST00000428380 1279 ntBASIC8.84□□□□□ -0.99
USP35Q9P2H5 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 AL138787.1-202ENST00000437804 898 ntBASIC8.84□□□□□ -0.99
USP35Q9P2H5 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
USP35Q9P2H5 CDY20P-201ENST00000447528 1279 ntBASIC8.84□□□□□ -0.99
USP35Q9P2H5 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 AP002453.1-201ENST00000492327 668 ntBASIC8.84□□□□□ -0.99
USP35Q9P2H5 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 AC027308.1-201ENST00000517993 110 ntBASIC8.84□□□□□ -0.99
USP35Q9P2H5 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
USP35Q9P2H5 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
USP35Q9P2H5 LINC00557-201ENST00000563184 1279 ntBASIC8.84□□□□□ -0.99
USP35Q9P2H5 AC015818.6-201ENST00000584274 634 ntBASIC8.84□□□□□ -0.99
USP35Q9P2H5 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 AC005972.3-201ENST00000606304 481 ntBASIC8.84□□□□□ -0.99
USP35Q9P2H5 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 AL356490.1-201ENST00000623079 479 ntBASIC8.84□□□□□ -0.99
USP35Q9P2H5 AL359195.2-201ENST00000623657 4412 ntBASIC8.84□□□□□ -0.99
USP35Q9P2H5 AC034229.6-201ENST00000623704 224 ntBASIC8.84□□□□□ -0.99
USP35Q9P2H5 DDX18P6-201ENST00000450119 1997 ntBASIC8.84□□□□□ -0.99
USP35Q9P2H5 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
USP35Q9P2H5 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
USP35Q9P2H5 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC8.84□□□□□ -1
USP35Q9P2H5 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
USP35Q9P2H5 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC8.83□□□□□ -1
USP35Q9P2H5 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
USP35Q9P2H5 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.83□□□□□ -1
USP35Q9P2H5 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC8.83□□□□□ -1
USP35Q9P2H5 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
USP35Q9P2H5 RARSP1-201ENST00000542842 1418 ntBASIC8.83□□□□□ -1
USP35Q9P2H5 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
USP35Q9P2H5 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC8.83□□□□□ -1
USP35Q9P2H5 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC8.83□□□□□ -1
USP35Q9P2H5 SNORA70.3-201ENST00000365075 132 ntBASIC8.83□□□□□ -1
USP35Q9P2H5 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
USP35Q9P2H5 RNU2-72P-201ENST00000411175 163 ntBASIC8.83□□□□□ -1
USP35Q9P2H5 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms