Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 AC097486.1-201ENST00000515331 210 ntBASIC6.36□□□□□ -1.39
TRIM4Q9C037 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 RPL29P33-201ENST00000587474 316 ntBASIC6.36□□□□□ -1.39
TRIM4Q9C037 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 AC012175.1-201ENST00000603755 531 ntBASIC6.36□□□□□ -1.39
TRIM4Q9C037 AC017037.4-201ENST00000624526 826 ntBASIC6.36□□□□□ -1.39
TRIM4Q9C037 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM4Q9C037 AL451064.2-201ENST00000623514 1654 ntBASIC6.36□□□□□ -1.39
TRIM4Q9C037 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM4Q9C037 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM4Q9C037 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM4Q9C037 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM4Q9C037 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM4Q9C037 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM4Q9C037 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM4Q9C037 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 AC010624.4-201ENST00000597606 1351 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 AC074141.1-201ENST00000588129 2995 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 AC092451.3-201ENST00000625067 1343 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM4Q9C037 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM4Q9C037 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 CYCSP51-201ENST00000443545 318 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 AC090602.1-201ENST00000469695 252 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 H3F3AP5-201ENST00000475267 429 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 RPL23AP68-201ENST00000480924 445 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 NPM1P21-201ENST00000513394 762 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 RN7SKP196-201ENST00000516267 345 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 AP005639.1-201ENST00000526939 192 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 OR52K3P-201ENST00000531655 943 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM4Q9C037 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 AC010487.1-201ENST00000594408 1172 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 AP001267.4-201ENST00000602598 545 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 AL953862.2-201ENST00000603089 820 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 AC002069.2-201ENST00000603580 883 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 AC010333.3-201ENST00000615100 402 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 KARSP1-201ENST00000451871 1752 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 AC015689.2-201ENST00000528172 1738 ntBASIC6.35□□□□□ -1.39
TRIM4Q9C037 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM4Q9C037 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM4Q9C037 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM4Q9C037 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM4Q9C037 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM4Q9C037 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM4Q9C037 OR7A2P-201ENST00000304105 930 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
TRIM4Q9C037 MIR133A2-201ENST00000347538 102 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM4Q9C037 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM4Q9C037 YWHAZP6-201ENST00000399764 738 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 TMA16P2-201ENST00000413187 601 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM4Q9C037 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM4Q9C037 AL354868.1-201ENST00000417077 482 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 AC009506.2-201ENST00000420635 840 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 ETF1P1-206ENST00000427296 984 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 NPM1P25-201ENST00000429734 854 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 AC245452.2-201ENST00000435222 392 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM4Q9C037 AMYP1-201ENST00000440059 1023 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM4Q9C037 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM4Q9C037 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM4Q9C037 RN7SL552P-201ENST00000462094 276 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 RN7SL174P-201ENST00000475578 289 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 RN7SL177P-201ENST00000476596 299 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 AC006539.1-201ENST00000481419 501 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 AC124945.1-201ENST00000485133 188 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 RPS4XP14-201ENST00000493072 781 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 AC117500.1-201ENST00000497352 755 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM4Q9C037 AC093664.1-201ENST00000511779 289 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM4Q9C037 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM4Q9C037 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM4Q9C037 AC026458.1-201ENST00000564330 438 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 AL078601.3-201ENST00000573303 535 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM4Q9C037 AC011445.2-201ENST00000599274 173 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM4Q9C037 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM4Q9C037 AC114546.4-201ENST00000624413 369 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms