Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RN7SL131P-201ENST00000579043 256 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AC134669.1-201ENST00000581275 672 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 PCNAP1-202ENST00000595299 752 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AC004852.1-201ENST00000605206 154 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 pRNA.9-201ENST00000618609 89 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AC073569.3-201ENST00000619055 682 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 DDX50P1-201ENST00000438163 2400 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 API5P1-201ENST00000424316 1510 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 MTCO1P15-201ENST00000529569 1526 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 VN2R3P-201ENST00000422626 1412 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 MROH3P-201ENST00000435735 2676 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 UBE2Q2P1-202ENST00000354771 883 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 RN7SKP211-201ENST00000363328 315 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 RNU4-68P-201ENST00000364314 141 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 RNU6-1263P-201ENST00000384601 106 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 HMGB3P31-201ENST00000413333 595 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC231533.2-201ENST00000419045 978 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC010099.3-201ENST00000423896 409 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 YWHAZP2-201ENST00000440317 728 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AL034399.1-201ENST00000451535 380 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 RPL7P45-201ENST00000455851 743 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC117395.2-201ENST00000463122 1128 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC079203.1-201ENST00000487972 404 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC122714.1-201ENST00000502510 459 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 MTHFD2P4-201ENST00000515074 1025 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC109635.6-201ENST00000525487 1113 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC126177.6-201ENST00000550420 1009 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 MIR1273F-201ENST00000580581 99 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC006116.6-201ENST00000593258 1103 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AL390058.1-201ENST00000603834 629 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC108451.2-201ENST00000603875 538 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC092954.1-201ENST00000609121 445 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC241377.1-201ENST00000619797 406 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC073862.4-201ENST00000622982 854 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC007347.2-201ENST00000623044 180 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC024023.1-201ENST00000624530 922 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 AC090897.3-201ENST00000636973 1157 ntBASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms