Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 RNA5SP218-201ENST00000363188 109 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 U3.14-201ENST00000365363 227 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 RNA5SP238-201ENST00000365464 120 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 PTCD2P2-201ENST00000415579 1095 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC090960.1-201ENST00000421072 306 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC092646.1-201ENST00000427142 901 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC009362.1-201ENST00000427253 406 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 NPM1P22-201ENST00000427761 952 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AP001324.1-201ENST00000428553 399 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC234781.3-201ENST00000452540 973 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 MRPL42P4-201ENST00000453267 443 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 BX248409.1-201ENST00000455497 255 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AL133244.1-201ENST00000456007 258 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC005550.2-201ENST00000476382 318 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC118282.2-201ENST00000508739 374 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 CFI-204ENST00000510800 667 ntTSL 2 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 RPS23-208ENST00000512493 443 ntTSL 3 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 HMGB1P42-201ENST00000532126 553 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC087465.1-201ENST00000560574 245 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC109446.2-201ENST00000567872 497 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 VN1R84P-201ENST00000593697 235 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC090246.1-201ENST00000616499 426 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AL035425.4-201ENST00000624509 1063 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 EEF1A1P5-201ENST00000436459 1389 ntBASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
TRAIPQ9BWF2 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 DDX18P5-201ENST00000534547 1306 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 TMSB4XP8-201ENST00000402089 135 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AL445213.1-201ENST00000412589 747 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 RAP1BP1-201ENST00000412709 553 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 TMSB4XP6-201ENST00000415187 135 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AC009518.2-201ENST00000418056 731 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AC006960.1-201ENST00000419980 153 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 GAPDHP49-201ENST00000421421 961 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 TMSB4XP1-201ENST00000424567 135 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 RPS24P8-201ENST00000431490 402 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 RPL21P110-201ENST00000433345 446 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 HMGB1P45-201ENST00000435986 653 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AL133217.1-201ENST00000450980 425 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 RBMY2HP-201ENST00000457961 720 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 TECRP2-201ENST00000503270 928 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 RPF2P2-201ENST00000504693 896 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AC008496.1-201ENST00000509131 295 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 MRPS33P3-201ENST00000513456 322 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms