Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.44□□□□□ -1.54
SSX3Q99909 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX3Q99909 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX3Q99909 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX3Q99909 GTF2IP14-201ENST00000441415 586 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.44□□□□□ -1.54
SSX3Q99909 RPS18P1-201ENST00000447840 458 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 AC004890.1-201ENST00000461005 181 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 RN7SL552P-201ENST00000462094 276 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 AC114728.1-201ENST00000488289 483 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 RPL9P15-201ENST00000491096 532 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SSX3Q99909 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX3Q99909 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.44□□□□□ -1.54
SSX3Q99909 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.44□□□□□ -1.54
SSX3Q99909 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.44□□□□□ -1.54
SSX3Q99909 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSX3Q99909 CCNHP1-201ENST00000513311 678 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX3Q99909 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX3Q99909 AC020937.1-201ENST00000519677 1013 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX3Q99909 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.44□□□□□ -1.54
SSX3Q99909 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX3Q99909 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX3Q99909 AC110056.1-201ENST00000525759 911 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
SSX3Q99909 AC007068.2-201ENST00000543168 395 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.44□□□□□ -1.54
SSX3Q99909 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.44□□□□□ -1.54
SSX3Q99909 ANP32BP1-202ENST00000568553 737 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.44□□□□□ -1.54
SSX3Q99909 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX3Q99909 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.44□□□□□ -1.54
SSX3Q99909 CTSLP2-201ENST00000580501 394 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX3Q99909 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSX3Q99909 MIR4732-201ENST00000581873 76 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 AP000919.1-201ENST00000582850 985 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 MIR212-201ENST00000586026 110 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX3Q99909 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.44□□□□□ -1.54
SSX3Q99909 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX3Q99909 AC107905.1-201ENST00000616204 426 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 AC068213.1-201ENST00000625124 226 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 SNORA16A-202ENST00000628458 135 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSX3Q99909 AC010266.2-201ENST00000564741 3255 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSX3Q99909 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.44□□□□□ -1.54
SSX3Q99909 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSX3Q99909 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSX3Q99909 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.44□□□□□ -1.54
SSX3Q99909 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSX3Q99909 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
SSX3Q99909 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSX3Q99909 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SSX3Q99909 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX3Q99909 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX3Q99909 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX3Q99909 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SSX3Q99909 FANCD2P2-201ENST00000437591 1400 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX3Q99909 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX3Q99909 AC006511.3-201ENST00000624929 1783 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 AL355834.1-201ENST00000556602 3965 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SSX3Q99909 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SSX3Q99909 MIR133A2-201ENST00000347538 102 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SSX3Q99909 AL121977.1-201ENST00000401636 979 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SSX3Q99909 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX3Q99909 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX3Q99909 AC239367.3-201ENST00000428996 814 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 GAPDHP19-201ENST00000431768 1005 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 UBE2V2P3-201ENST00000433562 437 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 AC096632.2-201ENST00000438139 1239 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.43□□□□□ -1.54
SSX3Q99909 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.43□□□□□ -1.54
SSX3Q99909 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.43□□□□□ -1.54
SSX3Q99909 AC015524.1-201ENST00000491585 472 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 RN7SL143P-201ENST00000496780 297 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX3Q99909 AC122713.1-201ENST00000518368 1015 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX3Q99909 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX3Q99909 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX3Q99909 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX3Q99909 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX3Q99909 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms