Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 Y_RNA.812-201ENST00000610788 101 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 Y_RNA.784-201ENST00000613803 101 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC245407.2-201ENST00000614199 451 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 Y_RNA.787-201ENST00000616522 101 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 Y_RNA.780-201ENST00000617336 101 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 Y_RNA.801-201ENST00000619005 101 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AL512662.1-201ENST00000624850 2251 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC130464.1-201ENST00000416201 1500 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC131649.2-201ENST00000624925 4439 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 MAPK10-333ENST00000641607 2481 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 SNORA10B-201ENST00000384458 133 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC123904.1-201ENST00000441072 368 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 RPL24P8-201ENST00000446071 474 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 RPL7L1P11-201ENST00000446092 721 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 RPL7P45-201ENST00000455851 743 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 RN7SL251P-201ENST00000464175 297 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 CABYRP1-201ENST00000465493 1045 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 PDCL3P4-201ENST00000489621 720 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 MTND4LP22-201ENST00000508209 276 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 BTG1P1-201ENST00000540396 508 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC093012.1-202ENST00000549403 582 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC037479.1-201ENST00000558361 625 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 OR2BH1P-201ENST00000608850 864 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AC117490.2-201ENST00000610042 594 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 UBE2Q2P2-203ENST00000613592 761 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 SAMMSON-214ENST00000641395 1264 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 CCDC162P-202ENST00000368966 6751 ntBASIC8.73□□□□□ -1.01
TRIM47Q96LD4 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC8.73□□□□□ -1.01
TRIM47Q96LD4 AP005139.1-201ENST00000580702 1647 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 WASF5P-205ENST00000428639 1455 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AC066616.2-201ENST00000559334 1481 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms