Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 AC005519.1-201ENST00000554490 601 ntBASIC6.02□□□□□ -1.45
VPS33AQ96AX1 TPRX1P1-201ENST00000557620 319 ntBASIC6.02□□□□□ -1.45
VPS33AQ96AX1 AC092718.4-201ENST00000566639 716 ntBASIC6.02□□□□□ -1.45
VPS33AQ96AX1 MIR378H-201ENST00000579966 83 ntBASIC6.02□□□□□ -1.45
VPS33AQ96AX1 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 RPL29P33-201ENST00000587474 316 ntBASIC6.02□□□□□ -1.45
VPS33AQ96AX1 FAM60CP-201ENST00000591086 664 ntBASIC6.02□□□□□ -1.45
VPS33AQ96AX1 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 MIR7854-201ENST00000620068 65 ntBASIC6.02□□□□□ -1.45
VPS33AQ96AX1 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC6.02□□□□□ -1.45
VPS33AQ96AX1 AC025262.3-201ENST00000623666 360 ntBASIC6.02□□□□□ -1.45
VPS33AQ96AX1 LINC02495-203ENST00000636704 242 ntBASIC6.02□□□□□ -1.45
VPS33AQ96AX1 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS33AQ96AX1 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 CLCN3P1-201ENST00000423965 1017 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC092106.2-201ENST00000436597 487 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC083855.1-201ENST00000440041 258 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AL845321.1-201ENST00000444603 348 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC007386.1-201ENST00000455212 582 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AL445687.2-201ENST00000458156 728 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC114940.1-201ENST00000512162 1265 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 RNU6-751P-201ENST00000516382 101 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 RNA5SP400-201ENST00000517155 111 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AP002981.1-201ENST00000517692 975 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 HNRNPCP8-201ENST00000528764 888 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 RN7SL475P-201ENST00000583379 298 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC027229.1-201ENST00000583887 253 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AL589863.1-201ENST00000595383 631 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC073046.2-201ENST00000604756 527 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 RPL12P48-201ENST00000605620 304 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 BNIP3P7-201ENST00000605641 516 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AL590410.1-201ENST00000617925 333 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AP000550.3-201ENST00000637734 379 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 HDAC1P2-201ENST00000453661 1398 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC092070.2-203ENST00000598377 3644 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AC004656.1-201ENST00000568479 4951 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 RPL31P11-201ENST00000426558 1558 ntBASIC6.01□□□□□ -1.45
VPS33AQ96AX1 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS33AQ96AX1 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6□□□□□ -1.45
VPS33AQ96AX1 AC087516.1-201ENST00000561236 2428 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS33AQ96AX1 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS33AQ96AX1 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms