Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 VPS45-201ENST00000369128 2224 ntTSL 2 BASIC7.72□□□□□ -1.17
HPS1Q92902 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 AC068733.2-201ENST00000605434 1418 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
HPS1Q92902 ZNF840P-201ENST00000504759 1996 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
HPS1Q92902 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 Y_RNA.1-201ENST00000352915 104 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 RNA5SP88-201ENST00000365560 109 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 RNU6-1103P-201ENST00000384150 107 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 RNU6-185P-201ENST00000384421 107 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 MIR568-201ENST00000385036 95 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 EIF4A1P8-201ENST00000394444 1190 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.72□□□□□ -1.17
HPS1Q92902 RNU6-908P-201ENST00000410160 94 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 RN7SKP32-201ENST00000410167 303 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 Y_RNA.598-201ENST00000410480 95 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 RPSAP63-201ENST00000412013 888 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 RPL4P5-201ENST00000413888 1276 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 AC097059.2-201ENST00000414039 592 ntTSL 3 BASIC7.72□□□□□ -1.17
HPS1Q92902 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.72□□□□□ -1.17
HPS1Q92902 B3GALNT1P1-201ENST00000420569 975 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 AC011998.2-201ENST00000430884 473 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.72□□□□□ -1.17
HPS1Q92902 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 HMGB1P45-201ENST00000435986 653 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.72□□□□□ -1.17
HPS1Q92902 AL109933.1-201ENST00000448126 292 ntTSL 5 BASIC7.72□□□□□ -1.17
HPS1Q92902 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC7.72□□□□□ -1.17
HPS1Q92902 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.72□□□□□ -1.17
HPS1Q92902 POLR2CP1-201ENST00000453699 765 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
HPS1Q92902 RPL7P48-201ENST00000461513 746 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 XACT-201ENST00000468762 497 ntTSL 5 BASIC7.72□□□□□ -1.17
HPS1Q92902 RAD51AP1P1-201ENST00000484195 1001 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 MTND1P3-201ENST00000484956 952 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.72□□□□□ -1.17
HPS1Q92902 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC7.72□□□□□ -1.17
HPS1Q92902 AC093281.1-201ENST00000514239 549 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 RN7SKP40-201ENST00000517211 242 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.72□□□□□ -1.17
HPS1Q92902 ATOX1-202ENST00000520382 466 ntTSL 5 BASIC7.72□□□□□ -1.17
HPS1Q92902 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC7.72□□□□□ -1.17
HPS1Q92902 AC008514.1-201ENST00000521965 602 ntTSL 3 BASIC7.72□□□□□ -1.17
HPS1Q92902 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC7.72□□□□□ -1.17
HPS1Q92902 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.72□□□□□ -1.17
HPS1Q92902 SAP30L-AS1-204ENST00000524264 1039 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 AP003122.4-201ENST00000530980 758 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 LMO3-222ENST00000540445 906 ntTSL 2 BASIC7.72□□□□□ -1.17
HPS1Q92902 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC7.72□□□□□ -1.17
HPS1Q92902 FRG2GP-201ENST00000567870 615 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.72□□□□□ -1.17
HPS1Q92902 AC004147.5-201ENST00000581727 536 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 AC006557.4-201ENST00000585516 830 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 RPL12P25-202ENST00000598100 674 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 AC011416.3-201ENST00000603971 355 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 AC091488.1-201ENST00000604239 660 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 AC244255.1-201ENST00000613463 398 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 AC008250.2-201ENST00000615261 205 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 AC243830.3-201ENST00000616810 376 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 CD200R1L-205ENST00000617549 762 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
HPS1Q92902 Metazoa_SRP.175-201ENST00000619837 250 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
HPS1Q92902 C2orf27A-204ENST00000623058 969 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 TPTEP1-208ENST00000636884 213 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
HPS1Q92902 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.72□□□□□ -1.17
HPS1Q92902 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.72□□□□□ -1.17
HPS1Q92902 MOSPD2-204ENST00000482354 1870 ntTSL 5 BASIC7.72□□□□□ -1.17
HPS1Q92902 OR4P4-202ENST00000641760 2086 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
HPS1Q92902 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
HPS1Q92902 AC133561.2-202ENST00000561642 1301 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 CHI3L2-204ENST00000466741 1518 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 AC010886.1-201ENST00000437380 2869 ntBASIC7.72□□□□□ -1.17
HPS1Q92902 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.72□□□□□ -1.17
HPS1Q92902 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HPS1Q92902 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.72□□□□□ -1.17
HPS1Q92902 AC078881.1-201ENST00000507023 2161 ntTSL 2 BASIC7.71□□□□□ -1.17
HPS1Q92902 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
HPS1Q92902 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
HPS1Q92902 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
HPS1Q92902 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
HPS1Q92902 CR786580.1-201ENST00000417843 2878 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
HPS1Q92902 LINC01410-201ENST00000424345 2877 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
HPS1Q92902 LRRC37A11P-202ENST00000579258 3717 ntBASIC7.71□□□□□ -1.17
HPS1Q92902 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
HPS1Q92902 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HPS1Q92902 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HPS1Q92902 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms