Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC4Q92889 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
ERCC4Q92889 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC4Q92889 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC4Q92889 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.32□□□□□ -1.24
ERCC4Q92889 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.32□□□□□ -1.24
ERCC4Q92889 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.31□□□□□ -1.24
ERCC4Q92889 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ERCC4Q92889 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.31□□□□□ -1.24
ERCC4Q92889 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
ERCC4Q92889 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.31□□□□□ -1.24
ERCC4Q92889 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
ERCC4Q92889 AC107977.1-201ENST00000355745 939 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 SNORA27.3-201ENST00000364937 134 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC7.31□□□□□ -1.24
ERCC4Q92889 SNORA70.9-201ENST00000384370 135 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 RPL5P20-201ENST00000403848 896 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 AL079341.1-201ENST00000404701 1207 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 OR2W4P-201ENST00000406496 926 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 AL451061.1-201ENST00000407887 862 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ERCC4Q92889 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC7.31□□□□□ -1.24
ERCC4Q92889 AC007568.1-201ENST00000422912 471 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.31□□□□□ -1.24
ERCC4Q92889 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ERCC4Q92889 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ERCC4Q92889 AL392003.1-201ENST00000434394 243 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 AC013410.1-201ENST00000436223 1232 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC7.31□□□□□ -1.24
ERCC4Q92889 AC083855.1-201ENST00000440041 258 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 TPTE2P3-201ENST00000441562 1189 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 GAPDHP33-201ENST00000443168 1013 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.31□□□□□ -1.24
ERCC4Q92889 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC7.31□□□□□ -1.24
ERCC4Q92889 RN7SL37P-201ENST00000490461 307 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.31□□□□□ -1.24
ERCC4Q92889 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.31□□□□□ -1.24
ERCC4Q92889 AC008429.2-201ENST00000523057 864 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 IGKV2-4-201ENST00000523070 340 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.31□□□□□ -1.24
ERCC4Q92889 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC7.31□□□□□ -1.24
ERCC4Q92889 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.31□□□□□ -1.24
ERCC4Q92889 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.31□□□□□ -1.24
ERCC4Q92889 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.31□□□□□ -1.24
ERCC4Q92889 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.31□□□□□ -1.24
ERCC4Q92889 AC245052.7-201ENST00000601161 359 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.31□□□□□ -1.24
ERCC4Q92889 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
ERCC4Q92889 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC7.31□□□□□ -1.24
ERCC4Q92889 TCL6_3.1-201ENST00000619064 137 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 AC021422.1-201ENST00000621212 473 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.31□□□□□ -1.24
ERCC4Q92889 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.31□□□□□ -1.24
ERCC4Q92889 AC006453.3-201ENST00000635891 377 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 AC004014.2-201ENST00000623718 5122 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
ERCC4Q92889 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ERCC4Q92889 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ERCC4Q92889 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ERCC4Q92889 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ERCC4Q92889 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 AC092724.1-201ENST00000624623 3397 ntBASIC7.31□□□□□ -1.24
ERCC4Q92889 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.3□□□□□ -1.24
ERCC4Q92889 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ERCC4Q92889 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
ERCC4Q92889 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ERCC4Q92889 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ERCC4Q92889 AC110373.1-201ENST00000505994 3505 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ERCC4Q92889 OR7A2P-201ENST00000304105 930 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
ERCC4Q92889 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ERCC4Q92889 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
ERCC4Q92889 STAT4-203ENST00000409995 709 ntTSL 5 BASIC7.3□□□□□ -1.24
ERCC4Q92889 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ERCC4Q92889 AC092447.3-201ENST00000426027 686 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 UBE2D3P3-201ENST00000426992 425 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.3□□□□□ -1.24
ERCC4Q92889 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC7.3□□□□□ -1.24
ERCC4Q92889 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ERCC4Q92889 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ERCC4Q92889 AL121578.2-201ENST00000448797 447 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC7.3□□□□□ -1.24
ERCC4Q92889 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC7.3□□□□□ -1.24
ERCC4Q92889 TREML3P-201ENST00000457327 501 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.3□□□□□ -1.24
ERCC4Q92889 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.3□□□□□ -1.24
ERCC4Q92889 AC108729.2-201ENST00000476543 840 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC7.3□□□□□ -1.24
ERCC4Q92889 RPS3AP6-201ENST00000484430 795 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC7.3□□□□□ -1.24
ERCC4Q92889 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC7.3□□□□□ -1.24
ERCC4Q92889 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ERCC4Q92889 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.3□□□□□ -1.24
ERCC4Q92889 AC079148.1-201ENST00000565944 819 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 FAM60CP-201ENST00000591086 664 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 AL583832.1-201ENST00000603227 784 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms