Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.29□□□□□ -1.56
AP3S1Q92572 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.29□□□□□ -1.56
AP3S1Q92572 SCARNA11.1-201ENST00000516918 132 ntBASIC5.29□□□□□ -1.56
AP3S1Q92572 CARSP2-201ENST00000520688 277 ntBASIC5.29□□□□□ -1.56
AP3S1Q92572 AC078899.1-201ENST00000521432 1185 ntBASIC5.29□□□□□ -1.56
AP3S1Q92572 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.29□□□□□ -1.56
AP3S1Q92572 AP003041.2-201ENST00000525666 1180 ntBASIC5.29□□□□□ -1.56
AP3S1Q92572 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.29□□□□□ -1.56
AP3S1Q92572 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.29□□□□□ -1.56
AP3S1Q92572 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.29□□□□□ -1.56
AP3S1Q92572 AC126615.2-201ENST00000553003 515 ntBASIC5.29□□□□□ -1.56
AP3S1Q92572 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
AP3S1Q92572 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC5.29□□□□□ -1.56
AP3S1Q92572 AC092718.4-201ENST00000566639 716 ntBASIC5.29□□□□□ -1.56
AP3S1Q92572 AC005332.4-201ENST00000592752 579 ntBASIC5.29□□□□□ -1.56
AP3S1Q92572 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.29□□□□□ -1.56
AP3S1Q92572 AL132821.1-201ENST00000616029 394 ntBASIC5.29□□□□□ -1.56
AP3S1Q92572 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
AP3S1Q92572 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.29□□□□□ -1.56
AP3S1Q92572 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
AP3S1Q92572 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
AP3S1Q92572 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.29□□□□□ -1.56
AP3S1Q92572 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
AP3S1Q92572 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
AP3S1Q92572 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.29□□□□□ -1.56
AP3S1Q92572 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
AP3S1Q92572 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
AP3S1Q92572 MTND5P12-201ENST00000502851 1449 ntBASIC5.29□□□□□ -1.56
AP3S1Q92572 AC130304.1-201ENST00000622942 2385 ntBASIC5.29□□□□□ -1.56
AP3S1Q92572 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.29□□□□□ -1.56
AP3S1Q92572 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.29□□□□□ -1.56
AP3S1Q92572 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
AP3S1Q92572 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.29□□□□□ -1.56
AP3S1Q92572 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.29□□□□□ -1.56
AP3S1Q92572 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
AP3S1Q92572 TCP11X1-202ENST00000622971 1372 ntBASIC5.29□□□□□ -1.56
AP3S1Q92572 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S1Q92572 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
AP3S1Q92572 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
AP3S1Q92572 AC006484.1-201ENST00000435086 1884 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S1Q92572 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.28□□□□□ -1.56
AP3S1Q92572 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.28□□□□□ -1.56
AP3S1Q92572 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
AP3S1Q92572 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.28□□□□□ -1.56
AP3S1Q92572 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S1Q92572 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S1Q92572 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S1Q92572 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.28□□□□□ -1.56
AP3S1Q92572 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S1Q92572 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S1Q92572 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S1Q92572 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S1Q92572 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.28□□□□□ -1.56
AP3S1Q92572 U3.52-201ENST00000384034 216 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 HIST1H2BPS2-201ENST00000402707 340 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 AL079341.1-201ENST00000404701 1207 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 AL445213.1-201ENST00000412589 747 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC5.28□□□□□ -1.56
AP3S1Q92572 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.28□□□□□ -1.56
AP3S1Q92572 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.28□□□□□ -1.56
AP3S1Q92572 AC242426.1-201ENST00000435270 960 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
AP3S1Q92572 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.28□□□□□ -1.56
AP3S1Q92572 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.28□□□□□ -1.56
AP3S1Q92572 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.28□□□□□ -1.56
AP3S1Q92572 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC5.28□□□□□ -1.56
AP3S1Q92572 RN7SL643P-201ENST00000471845 291 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 RN7SL836P-201ENST00000476140 296 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.28□□□□□ -1.56
AP3S1Q92572 RPL34P29-201ENST00000491411 325 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.28□□□□□ -1.56
AP3S1Q92572 ENPP7P3-201ENST00000509123 241 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.28□□□□□ -1.56
AP3S1Q92572 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.28□□□□□ -1.56
AP3S1Q92572 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.28□□□□□ -1.56
AP3S1Q92572 AC020937.1-201ENST00000519677 1013 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.28□□□□□ -1.56
AP3S1Q92572 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.28□□□□□ -1.56
AP3S1Q92572 AC090424.1-201ENST00000535243 736 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.28□□□□□ -1.56
AP3S1Q92572 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.28□□□□□ -1.56
AP3S1Q92572 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.28□□□□□ -1.56
AP3S1Q92572 RNU4ATAC-201ENST00000580972 127 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.28□□□□□ -1.56
AP3S1Q92572 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC5.28□□□□□ -1.56
AP3S1Q92572 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC5.28□□□□□ -1.56
AP3S1Q92572 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
AP3S1Q92572 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
AP3S1Q92572 AC073046.2-201ENST00000604756 527 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 RPL17P3-201ENST00000605695 525 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 AL353729.2-201ENST00000605859 1249 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 SNORA74.4-201ENST00000607595 199 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 Z95327.3-201ENST00000610385 572 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 RN7SL261P-201ENST00000613441 282 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 AC127071.2-201ENST00000623293 527 ntBASIC5.28□□□□□ -1.56
AP3S1Q92572 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.28□□□□□ -1.56
AP3S1Q92572 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S1Q92572 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S1Q92572 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms