Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC9.87□□□□□ -0.83
TOPBP1Q92547 AL035090.1-201ENST00000454835 332 ntBASIC9.87□□□□□ -0.83
TOPBP1Q92547 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TOPBP1Q92547 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC9.87□□□□□ -0.83
TOPBP1Q92547 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
TOPBP1Q92547 AC126177.5-201ENST00000549599 178 ntBASIC9.87□□□□□ -0.83
TOPBP1Q92547 HSPE1P2-201ENST00000554777 306 ntBASIC9.87□□□□□ -0.83
TOPBP1Q92547 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC9.87□□□□□ -0.83
TOPBP1Q92547 RBM22P12-201ENST00000567098 1255 ntBASIC9.87□□□□□ -0.83
TOPBP1Q92547 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC9.87□□□□□ -0.83
TOPBP1Q92547 APP-206ENST00000359726 3294 ntTSL 2 BASIC9.87□□□□□ -0.83
TOPBP1Q92547 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
TOPBP1Q92547 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
TOPBP1Q92547 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TOPBP1Q92547 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
TOPBP1Q92547 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC9.87□□□□□ -0.83
TOPBP1Q92547 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TOPBP1Q92547 AP002370.1-201ENST00000528055 1602 ntBASIC9.87□□□□□ -0.83
TOPBP1Q92547 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
TOPBP1Q92547 AL807761.1-201ENST00000417622 171 ntBASIC9.87□□□□□ -0.83
TOPBP1Q92547 AC073610.1-201ENST00000489971 396 ntBASIC9.87□□□□□ -0.83
TOPBP1Q92547 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC9.87□□□□□ -0.83
TOPBP1Q92547 AC110775.1-201ENST00000513721 462 ntBASIC9.87□□□□□ -0.83
TOPBP1Q92547 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC9.87□□□□□ -0.83
TOPBP1Q92547 OR1F2P-201ENST00000570470 933 ntBASIC9.87□□□□□ -0.83
TOPBP1Q92547 AC133644.2-201ENST00000608142 540 ntBASIC9.87□□□□□ -0.83
TOPBP1Q92547 FTO-215ENST00000636491 1676 ntTSL 5 BASIC9.86□□□□□ -0.83
TOPBP1Q92547 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
TOPBP1Q92547 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOPBP1Q92547 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOPBP1Q92547 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
TOPBP1Q92547 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC9.86□□□□□ -0.83
TOPBP1Q92547 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOPBP1Q92547 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC9.86□□□□□ -0.83
TOPBP1Q92547 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC9.86□□□□□ -0.83
TOPBP1Q92547 RN7SKP103-201ENST00000363848 320 ntBASIC9.86□□□□□ -0.83
TOPBP1Q92547 RNA5SP30-201ENST00000365552 115 ntBASIC9.86□□□□□ -0.83
TOPBP1Q92547 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC9.86□□□□□ -0.83
TOPBP1Q92547 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC9.86□□□□□ -0.83
TOPBP1Q92547 RPS26P13-201ENST00000419030 330 ntBASIC9.86□□□□□ -0.83
TOPBP1Q92547 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC9.86□□□□□ -0.83
TOPBP1Q92547 OR13C1P-201ENST00000457612 963 ntBASIC9.86□□□□□ -0.83
TOPBP1Q92547 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC9.86□□□□□ -0.83
TOPBP1Q92547 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC9.86□□□□□ -0.83
TOPBP1Q92547 AC010245.2-201ENST00000606908 1167 ntBASIC9.86□□□□□ -0.83
TOPBP1Q92547 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC9.86□□□□□ -0.83
TOPBP1Q92547 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOPBP1Q92547 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
TOPBP1Q92547 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC9.86□□□□□ -0.83
TOPBP1Q92547 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
TOPBP1Q92547 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOPBP1Q92547 EEF1A1P30-201ENST00000429708 1315 ntBASIC9.86□□□□□ -0.83
TOPBP1Q92547 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
TOPBP1Q92547 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
TOPBP1Q92547 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
TOPBP1Q92547 AC013488.1-201ENST00000526618 1838 ntBASIC9.85□□□□□ -0.83
TOPBP1Q92547 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TOPBP1Q92547 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
TOPBP1Q92547 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TOPBP1Q92547 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC9.85□□□□□ -0.83
TOPBP1Q92547 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
TOPBP1Q92547 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC9.85□□□□□ -0.83
TOPBP1Q92547 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC9.85□□□□□ -0.83
TOPBP1Q92547 MAPK10-344ENST00000641718 3746 ntBASIC9.85□□□□□ -0.83
TOPBP1Q92547 ATM-215ENST00000530958 5718 ntTSL 2 BASIC9.85□□□□□ -0.83
TOPBP1Q92547 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TOPBP1Q92547 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC9.85□□□□□ -0.83
TOPBP1Q92547 MIR765-201ENST00000390226 114 ntBASIC9.85□□□□□ -0.83
TOPBP1Q92547 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TOPBP1Q92547 AC092017.2-201ENST00000427600 362 ntBASIC9.85□□□□□ -0.83
TOPBP1Q92547 RPL7L1P9-201ENST00000431298 745 ntBASIC9.85□□□□□ -0.83
TOPBP1Q92547 AL663074.2-201ENST00000440621 479 ntBASIC9.85□□□□□ -0.83
TOPBP1Q92547 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC9.85□□□□□ -0.83
TOPBP1Q92547 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TOPBP1Q92547 RPEP1-201ENST00000504507 658 ntBASIC9.85□□□□□ -0.83
TOPBP1Q92547 AC139365.2-201ENST00000517972 253 ntBASIC9.85□□□□□ -0.83
TOPBP1Q92547 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC9.85□□□□□ -0.83
TOPBP1Q92547 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC9.85□□□□□ -0.83
TOPBP1Q92547 AL157831.2-201ENST00000564681 3095 ntBASIC9.85□□□□□ -0.83
TOPBP1Q92547 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
TOPBP1Q92547 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TOPBP1Q92547 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
TOPBP1Q92547 MFSD8-217ENST00000641178 4374 ntBASIC9.85□□□□□ -0.83
TOPBP1Q92547 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
TOPBP1Q92547 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
TOPBP1Q92547 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
TOPBP1Q92547 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TOPBP1Q92547 AC079753.1-201ENST00000623243 3868 ntBASIC9.84□□□□□ -0.83
TOPBP1Q92547 DPY19L2P2-203ENST00000435536 1858 ntBASIC9.84□□□□□ -0.83
TOPBP1Q92547 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC9.84□□□□□ -0.83
TOPBP1Q92547 AL645733.1-201ENST00000402250 217 ntBASIC9.84□□□□□ -0.83
TOPBP1Q92547 HMGB1P32-201ENST00000425971 565 ntBASIC9.84□□□□□ -0.83
TOPBP1Q92547 CYCSP6-201ENST00000434498 302 ntBASIC9.84□□□□□ -0.83
TOPBP1Q92547 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
TOPBP1Q92547 AC073850.1-201ENST00000449243 255 ntBASIC9.84□□□□□ -0.83
TOPBP1Q92547 VDAC2P4-201ENST00000452925 711 ntBASIC9.84□□□□□ -0.83
TOPBP1Q92547 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC9.84□□□□□ -0.83
TOPBP1Q92547 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
TOPBP1Q92547 AC147055.3-201ENST00000510547 851 ntBASIC9.84□□□□□ -0.83
TOPBP1Q92547 OR4A42P-201ENST00000531397 938 ntBASIC9.84□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms