Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.24
SNED1Q8TER0 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
SNED1Q8TER0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
SNED1Q8TER0 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SNED1Q8TER0 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SNED1Q8TER0 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SNED1Q8TER0 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 AC112243.1-201ENST00000623949 3851 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SNED1Q8TER0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 AC011815.2-201ENST00000618230 2021 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 AC105749.1-201ENST00000631338 2008 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SNED1Q8TER0 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 AC007342.5-201ENST00000571340 2142 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 MIR433-201ENST00000384837 93 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 RPL36P18-201ENST00000419316 318 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 NME1P1-201ENST00000420914 382 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 CFL1P1-202ENST00000432948 411 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 AL451136.1-201ENST00000435399 325 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 AC012075.1-201ENST00000436549 580 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 RPS7P3-201ENST00000443360 580 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 SPRYD7P1-201ENST00000443861 570 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 RN7SL57P-201ENST00000493687 290 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 AC008953.1-201ENST00000497334 318 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 MIR1269B-201ENST00000580405 75 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 AC005618.1-201ENST00000606901 3148 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 PARP4P1-201ENST00000435945 2337 ntBASIC7.33□□□□□ -1.24
SNED1Q8TER0 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.33□□□□□ -1.24
SNED1Q8TER0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SNED1Q8TER0 AP001541.1-201ENST00000623322 1904 ntBASIC7.32□□□□□ -1.24
SNED1Q8TER0 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
SNED1Q8TER0 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
SNED1Q8TER0 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SNED1Q8TER0 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SNED1Q8TER0 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SNED1Q8TER0 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNED1Q8TER0 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNED1Q8TER0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC7.32□□□□□ -1.24
SNED1Q8TER0 MRPL53P1-201ENST00000414323 319 ntBASIC7.32□□□□□ -1.24
SNED1Q8TER0 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.32□□□□□ -1.24
SNED1Q8TER0 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SNED1Q8TER0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.32□□□□□ -1.24
SNED1Q8TER0 FMO7P-201ENST00000436045 768 ntBASIC7.32□□□□□ -1.24
SNED1Q8TER0 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.32□□□□□ -1.24
SNED1Q8TER0 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.32□□□□□ -1.24
SNED1Q8TER0 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNED1Q8TER0 AC068522.1-201ENST00000482895 345 ntBASIC7.32□□□□□ -1.24
SNED1Q8TER0 AC044860.2-201ENST00000561005 179 ntBASIC7.32□□□□□ -1.24
SNED1Q8TER0 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.32□□□□□ -1.24
SNED1Q8TER0 MIR7155-201ENST00000615925 56 ntBASIC7.32□□□□□ -1.24
SNED1Q8TER0 AC079777.1-201ENST00000623836 1953 ntBASIC7.32□□□□□ -1.24
SNED1Q8TER0 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.32□□□□□ -1.24
SNED1Q8TER0 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SNED1Q8TER0 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.32□□□□□ -1.24
SNED1Q8TER0 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SNED1Q8TER0 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNED1Q8TER0 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SNED1Q8TER0 C4BPAP1-201ENST00000415474 1893 ntBASIC7.31□□□□□ -1.24
SNED1Q8TER0 SPATA31C1-201ENST00000420021 3895 ntBASIC7.31□□□□□ -1.24
SNED1Q8TER0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNED1Q8TER0 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SNED1Q8TER0 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNED1Q8TER0 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNED1Q8TER0 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNED1Q8TER0 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SNED1Q8TER0 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SNED1Q8TER0 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 RNU4-34P-201ENST00000410431 124 ntBASIC7.31□□□□□ -1.24
SNED1Q8TER0 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 Z84478.1-201ENST00000438230 1219 ntBASIC7.31□□□□□ -1.24
SNED1Q8TER0 OTX2P1-201ENST00000450956 354 ntBASIC7.31□□□□□ -1.24
SNED1Q8TER0 AC007386.1-201ENST00000455212 582 ntBASIC7.31□□□□□ -1.24
SNED1Q8TER0 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SNED1Q8TER0 AL157777.1-201ENST00000468100 304 ntBASIC7.31□□□□□ -1.24
SNED1Q8TER0 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 AC073581.1-201ENST00000519036 575 ntBASIC7.31□□□□□ -1.24
SNED1Q8TER0 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms