Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AC093752.1-206ENST00000511823 336 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 MTCYBP44-201ENST00000514835 823 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 NXPE2P1-201ENST00000543705 726 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 CHEK2P2-201ENST00000554701 672 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AC073333.2-201ENST00000603589 769 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AC096586.1-201ENST00000610267 561 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AC008121.2-201ENST00000614647 523 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AC005858.3-201ENST00000624756 589 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AL596275.2-203ENST00000641951 371 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AC129502.1-201ENST00000623261 1654 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 CUL4AP1-201ENST00000514750 1863 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 LPAL2-203ENST00000454031 2498 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AC007938.1-201ENST00000562524 2902 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AC011008.2-201ENST00000624866 3352 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 DDX43P2-201ENST00000604753 1354 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AC119751.3-201ENST00000399720 670 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AL445238.1-204ENST00000400311 463 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 MIR1302-8-201ENST00000408342 128 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AC244452.1-201ENST00000413798 141 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 TATDN1P1-201ENST00000414123 891 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AL773545.3-201ENST00000414297 706 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AL034399.1-201ENST00000451535 380 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 PSMA6P2-201ENST00000457574 686 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 RPS4XP23-201ENST00000487801 237 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 RNU6-319P-201ENST00000516025 108 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 RNA5SP318-201ENST00000516352 92 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AP003033.1-201ENST00000527244 415 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AC005244.1-201ENST00000582566 339 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AL109653.1-201ENST00000603091 248 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 Z99497.2-201ENST00000603634 310 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AP002345.2-201ENST00000609961 904 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 VN1R9P-201ENST00000614184 867 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms