Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ALFQ53S48 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.63□□□□□ -1.35
ALFQ53S48 AC005165.2-201ENST00000466070 380 ntBASIC6.63□□□□□ -1.35
ALFQ53S48 AC022905.1-201ENST00000503430 3048 ntBASIC6.63□□□□□ -1.35
ALFQ53S48 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.63□□□□□ -1.35
ALFQ53S48 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.63□□□□□ -1.35
ALFQ53S48 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.63□□□□□ -1.35
ALFQ53S48 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.63□□□□□ -1.35
ALFQ53S48 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ALFQ53S48 AP003033.2-201ENST00000528901 805 ntBASIC6.63□□□□□ -1.35
ALFQ53S48 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ALFQ53S48 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.63□□□□□ -1.35
ALFQ53S48 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.63□□□□□ -1.35
ALFQ53S48 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.63□□□□□ -1.35
ALFQ53S48 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.63□□□□□ -1.35
ALFQ53S48 AC011500.1-201ENST00000601963 469 ntBASIC6.63□□□□□ -1.35
ALFQ53S48 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.63□□□□□ -1.35
ALFQ53S48 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.63□□□□□ -1.35
ALFQ53S48 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.63□□□□□ -1.35
ALFQ53S48 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
ALFQ53S48 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.63□□□□□ -1.35
ALFQ53S48 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.63□□□□□ -1.35
ALFQ53S48 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ALFQ53S48 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
ALFQ53S48 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
ALFQ53S48 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ALFQ53S48 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
ALFQ53S48 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
ALFQ53S48 BIN2P1-201ENST00000504996 1530 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
ALFQ53S48 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 RNA5SP188-201ENST00000362916 129 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 RPL7P58-201ENST00000402913 758 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 AC002127.1-201ENST00000421305 225 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.62□□□□□ -1.35
ALFQ53S48 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.62□□□□□ -1.35
ALFQ53S48 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 AC011742.2-201ENST00000443818 352 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.62□□□□□ -1.35
ALFQ53S48 AC097359.1-201ENST00000447946 463 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.62□□□□□ -1.35
ALFQ53S48 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.62□□□□□ -1.35
ALFQ53S48 GM2AP2-201ENST00000491764 562 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 AC106822.1-201ENST00000502647 526 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.62□□□□□ -1.35
ALFQ53S48 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.62□□□□□ -1.35
ALFQ53S48 HMGN1P16-201ENST00000508308 283 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.62□□□□□ -1.35
ALFQ53S48 BCAS2P1-201ENST00000528022 632 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.62□□□□□ -1.35
ALFQ53S48 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.62□□□□□ -1.35
ALFQ53S48 TPRX1P1-201ENST00000557620 319 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 AC092868.3-201ENST00000560515 784 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.62□□□□□ -1.35
ALFQ53S48 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.62□□□□□ -1.35
ALFQ53S48 MT1CP-201ENST00000567054 174 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.62□□□□□ -1.35
ALFQ53S48 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.62□□□□□ -1.35
ALFQ53S48 AC026898.1-201ENST00000586404 571 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 AC097467.4-201ENST00000605504 141 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.62□□□□□ -1.35
ALFQ53S48 AC004241.3-201ENST00000611728 517 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 AC009032.1-201ENST00000617574 431 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 AL122023.1-201ENST00000622847 530 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 AC073869.7-201ENST00000640874 297 ntBASIC6.62□□□□□ -1.35
ALFQ53S48 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.62□□□□□ -1.35
ALFQ53S48 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
ALFQ53S48 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
ALFQ53S48 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
ALFQ53S48 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ALFQ53S48 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ALFQ53S48 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
ALFQ53S48 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.61□□□□□ -1.35
ALFQ53S48 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
ALFQ53S48 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ALFQ53S48 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.61□□□□□ -1.35
ALFQ53S48 AC007342.5-201ENST00000571340 2142 ntBASIC6.61□□□□□ -1.35
ALFQ53S48 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.61□□□□□ -1.35
ALFQ53S48 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
ALFQ53S48 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
ALFQ53S48 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.61□□□□□ -1.35
ALFQ53S48 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ALFQ53S48 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ALFQ53S48 RPL11P4-201ENST00000332269 436 ntBASIC6.61□□□□□ -1.35
ALFQ53S48 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
ALFQ53S48 RN7SKP250-201ENST00000363924 321 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms