Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.76□□□□□ -1.33
UBE3AQ05086 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
UBE3AQ05086 HIGD1AP16-201ENST00000450986 258 ntBASIC6.76□□□□□ -1.33
UBE3AQ05086 RPL5P12-201ENST00000477071 851 ntBASIC6.76□□□□□ -1.33
UBE3AQ05086 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.76□□□□□ -1.33
UBE3AQ05086 SNORD46.2-201ENST00000516021 102 ntBASIC6.76□□□□□ -1.33
UBE3AQ05086 RNA5SP340-201ENST00000517132 107 ntBASIC6.76□□□□□ -1.33
UBE3AQ05086 GTF2IP11-201ENST00000526931 420 ntBASIC6.76□□□□□ -1.33
UBE3AQ05086 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.76□□□□□ -1.33
UBE3AQ05086 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
UBE3AQ05086 DPPA3P2-202ENST00000557188 1219 ntBASIC6.76□□□□□ -1.33
UBE3AQ05086 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.76□□□□□ -1.33
UBE3AQ05086 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.76□□□□□ -1.33
UBE3AQ05086 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.76□□□□□ -1.33
UBE3AQ05086 AC018690.1-201ENST00000608144 626 ntBASIC6.76□□□□□ -1.33
UBE3AQ05086 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.76□□□□□ -1.33
UBE3AQ05086 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
UBE3AQ05086 AL356752.1-201ENST00000615844 593 ntBASIC6.76□□□□□ -1.33
UBE3AQ05086 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.76□□□□□ -1.33
UBE3AQ05086 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.76□□□□□ -1.33
UBE3AQ05086 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
UBE3AQ05086 AL132656.3-201ENST00000606384 1595 ntBASIC6.76□□□□□ -1.33
UBE3AQ05086 CASC19-228ENST00000641414 1684 ntBASIC6.76□□□□□ -1.33
UBE3AQ05086 AC027279.1-201ENST00000568885 4284 ntBASIC6.76□□□□□ -1.33
UBE3AQ05086 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
UBE3AQ05086 AC018717.1-201ENST00000457712 1505 ntBASIC6.76□□□□□ -1.33
UBE3AQ05086 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.75□□□□□ -1.33
UBE3AQ05086 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
UBE3AQ05086 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
UBE3AQ05086 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
UBE3AQ05086 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.75□□□□□ -1.33
UBE3AQ05086 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
UBE3AQ05086 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
UBE3AQ05086 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.75□□□□□ -1.33
UBE3AQ05086 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
UBE3AQ05086 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
UBE3AQ05086 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
UBE3AQ05086 RNA5SP110-201ENST00000362638 115 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
UBE3AQ05086 DHFRP5-201ENST00000406944 564 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.75□□□□□ -1.33
UBE3AQ05086 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.75□□□□□ -1.33
UBE3AQ05086 RPL12P43-201ENST00000420608 499 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 AC008753.1-201ENST00000423096 284 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 RPL34P27-201ENST00000428810 349 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.75□□□□□ -1.33
UBE3AQ05086 AC023141.3-201ENST00000436698 278 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
UBE3AQ05086 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.75□□□□□ -1.33
UBE3AQ05086 AC002553.3-201ENST00000453002 341 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.75□□□□□ -1.33
UBE3AQ05086 ACA64.1-201ENST00000459171 127 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.75□□□□□ -1.33
UBE3AQ05086 RPL34P33-201ENST00000486062 334 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 RN7SL561P-201ENST00000488553 281 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.75□□□□□ -1.33
UBE3AQ05086 AC063943.2-201ENST00000495697 534 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.75□□□□□ -1.33
UBE3AQ05086 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.75□□□□□ -1.33
UBE3AQ05086 AC090958.1-201ENST00000511122 351 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 OR5H7P-201ENST00000514084 930 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.75□□□□□ -1.33
UBE3AQ05086 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.75□□□□□ -1.33
UBE3AQ05086 AC090236.2-201ENST00000587933 1101 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 AC012467.1-201ENST00000607740 256 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.75□□□□□ -1.33
UBE3AQ05086 AC239803.2-201ENST00000610161 430 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 AL512652.1-201ENST00000619006 500 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
UBE3AQ05086 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
UBE3AQ05086 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
UBE3AQ05086 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
UBE3AQ05086 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.75□□□□□ -1.33
UBE3AQ05086 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
UBE3AQ05086 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.75□□□□□ -1.33
UBE3AQ05086 AC127070.3-201ENST00000503695 3263 ntBASIC6.75□□□□□ -1.33
UBE3AQ05086 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
UBE3AQ05086 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
UBE3AQ05086 AC092821.3-202ENST00000641304 2767 ntBASIC6.74□□□□□ -1.33
UBE3AQ05086 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
UBE3AQ05086 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
UBE3AQ05086 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
UBE3AQ05086 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
UBE3AQ05086 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
UBE3AQ05086 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
UBE3AQ05086 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
UBE3AQ05086 AC011455.2-201ENST00000599320 3336 ntBASIC6.74□□□□□ -1.33
UBE3AQ05086 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
UBE3AQ05086 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.74□□□□□ -1.33
UBE3AQ05086 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
UBE3AQ05086 SNORA21-201ENST00000362423 132 ntBASIC6.74□□□□□ -1.33
UBE3AQ05086 RNA5SP477-201ENST00000362639 119 ntBASIC6.74□□□□□ -1.33
UBE3AQ05086 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.74□□□□□ -1.33
UBE3AQ05086 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
UBE3AQ05086 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.74□□□□□ -1.33
UBE3AQ05086 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.74□□□□□ -1.33
UBE3AQ05086 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.74□□□□□ -1.33
UBE3AQ05086 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
UBE3AQ05086 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.74□□□□□ -1.33
UBE3AQ05086 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms