Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC110760.3-202ENST00000515177 371 ntBASIC6.03□□□□□ -1.44
RAE1P78406 RNA5SP418-201ENST00000515951 117 ntBASIC6.03□□□□□ -1.44
RAE1P78406 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.03□□□□□ -1.44
RAE1P78406 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.03□□□□□ -1.44
RAE1P78406 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RAE1P78406 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.03□□□□□ -1.44
RAE1P78406 AC009729.1-201ENST00000548873 1133 ntBASIC6.03□□□□□ -1.44
RAE1P78406 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.03□□□□□ -1.44
RAE1P78406 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.03□□□□□ -1.44
RAE1P78406 AC023968.1-201ENST00000560719 475 ntBASIC6.03□□□□□ -1.44
RAE1P78406 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RAE1P78406 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RAE1P78406 AC005332.4-201ENST00000592752 579 ntBASIC6.03□□□□□ -1.44
RAE1P78406 AC036176.3-201ENST00000602456 418 ntBASIC6.03□□□□□ -1.44
RAE1P78406 AL133247.2-201ENST00000603236 482 ntBASIC6.03□□□□□ -1.44
RAE1P78406 MTATP6P2-201ENST00000603319 678 ntBASIC6.03□□□□□ -1.44
RAE1P78406 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.03□□□□□ -1.44
RAE1P78406 AL021368.3-201ENST00000607119 578 ntBASIC6.03□□□□□ -1.44
RAE1P78406 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.03□□□□□ -1.44
RAE1P78406 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.03□□□□□ -1.44
RAE1P78406 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RAE1P78406 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RAE1P78406 AC009269.6-201ENST00000621778 588 ntBASIC6.03□□□□□ -1.44
RAE1P78406 AC018659.2-201ENST00000624690 715 ntBASIC6.03□□□□□ -1.44
RAE1P78406 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.03□□□□□ -1.44
RAE1P78406 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.03□□□□□ -1.44
RAE1P78406 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.03□□□□□ -1.44
RAE1P78406 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.03□□□□□ -1.44
RAE1P78406 HSPD1P8-201ENST00000400121 1658 ntBASIC6.03□□□□□ -1.44
RAE1P78406 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.03□□□□□ -1.44
RAE1P78406 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.03□□□□□ -1.44
RAE1P78406 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RAE1P78406 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.03□□□□□ -1.44
RAE1P78406 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RAE1P78406 AL136984.1-201ENST00000607611 1893 ntBASIC6.02□□□□□ -1.44
RAE1P78406 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.44
RAE1P78406 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.02□□□□□ -1.45
RAE1P78406 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
RAE1P78406 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 OR11H13P-201ENST00000359695 979 ntBASIC6.02□□□□□ -1.45
RAE1P78406 SNORD115-48-201ENST00000364764 76 ntBASIC6.02□□□□□ -1.45
RAE1P78406 RNA5SP251-201ENST00000410614 137 ntBASIC6.02□□□□□ -1.45
RAE1P78406 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
RAE1P78406 AC128677.1-201ENST00000436016 442 ntBASIC6.02□□□□□ -1.45
RAE1P78406 RPS19P6-201ENST00000441327 433 ntBASIC6.02□□□□□ -1.45
RAE1P78406 OR13K1P-201ENST00000444577 975 ntBASIC6.02□□□□□ -1.45
RAE1P78406 VPS25P1-201ENST00000455691 508 ntBASIC6.02□□□□□ -1.45
RAE1P78406 AL022319.1-201ENST00000458183 1167 ntBASIC6.02□□□□□ -1.45
RAE1P78406 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.02□□□□□ -1.45
RAE1P78406 AP003385.3-201ENST00000472498 287 ntBASIC6.02□□□□□ -1.45
RAE1P78406 RPS7P11-201ENST00000484240 586 ntBASIC6.02□□□□□ -1.45
RAE1P78406 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 MTCO2P9-201ENST00000503214 694 ntBASIC6.02□□□□□ -1.45
RAE1P78406 AC118282.1-201ENST00000506408 765 ntBASIC6.02□□□□□ -1.45
RAE1P78406 AC139713.1-202ENST00000512366 460 ntBASIC6.02□□□□□ -1.45
RAE1P78406 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 OR4V1P-201ENST00000525394 1140 ntBASIC6.02□□□□□ -1.45
RAE1P78406 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.02□□□□□ -1.45
RAE1P78406 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.02□□□□□ -1.45
RAE1P78406 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.02□□□□□ -1.45
RAE1P78406 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 AC023158.1-201ENST00000561632 1025 ntBASIC6.02□□□□□ -1.45
RAE1P78406 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.02□□□□□ -1.45
RAE1P78406 AC027229.1-201ENST00000583887 253 ntBASIC6.02□□□□□ -1.45
RAE1P78406 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.02□□□□□ -1.45
RAE1P78406 MIMT1-201ENST00000597105 1050 ntBASIC6.02□□□□□ -1.45
RAE1P78406 ZNF92P2-201ENST00000600543 1059 ntBASIC6.02□□□□□ -1.45
RAE1P78406 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.02□□□□□ -1.45
RAE1P78406 AL589743.6-201ENST00000611025 117 ntBASIC6.02□□□□□ -1.45
RAE1P78406 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.02□□□□□ -1.45
RAE1P78406 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.02□□□□□ -1.45
RAE1P78406 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.02□□□□□ -1.45
RAE1P78406 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
RAE1P78406 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 AL137058.3-201ENST00000624531 3099 ntBASIC6.02□□□□□ -1.45
RAE1P78406 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RAE1P78406 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
RAE1P78406 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.01□□□□□ -1.45
RAE1P78406 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RAE1P78406 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RAE1P78406 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
RAE1P78406 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RAE1P78406 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.01□□□□□ -1.45
RAE1P78406 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.01□□□□□ -1.45
RAE1P78406 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.01□□□□□ -1.45
RAE1P78406 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.01□□□□□ -1.45
RAE1P78406 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.01□□□□□ -1.45
RAE1P78406 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms