Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RPL39P62891 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 RNU1-5P-201ENST00000362684 144 ntBASIC4.18□□□□□ -1.74
RPL39P62891 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RPL39P62891 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.18□□□□□ -1.74
RPL39P62891 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RPL39P62891 AC003045.1-201ENST00000398779 713 ntBASIC4.18□□□□□ -1.74
RPL39P62891 AL353133.1-201ENST00000407695 401 ntBASIC4.18□□□□□ -1.74
RPL39P62891 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 RPS15AP30-201ENST00000420976 390 ntBASIC4.18□□□□□ -1.74
RPL39P62891 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC4.18□□□□□ -1.74
RPL39P62891 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.18□□□□□ -1.74
RPL39P62891 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.18□□□□□ -1.74
RPL39P62891 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC4.18□□□□□ -1.74
RPL39P62891 MED28P3-201ENST00000444288 531 ntBASIC4.18□□□□□ -1.74
RPL39P62891 COX4I1P2-201ENST00000447446 547 ntBASIC4.18□□□□□ -1.74
RPL39P62891 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.18□□□□□ -1.74
RPL39P62891 HNRNPDLP2-201ENST00000455248 751 ntBASIC4.18□□□□□ -1.74
RPL39P62891 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.18□□□□□ -1.74
RPL39P62891 AL603882.1-201ENST00000463059 681 ntBASIC4.18□□□□□ -1.74
RPL39P62891 RN7SL836P-201ENST00000476140 296 ntBASIC4.18□□□□□ -1.74
RPL39P62891 RPL12P31-201ENST00000478433 450 ntBASIC4.18□□□□□ -1.74
RPL39P62891 RPS10P28-201ENST00000480396 498 ntBASIC4.18□□□□□ -1.74
RPL39P62891 AC093816.1-201ENST00000515076 913 ntBASIC4.18□□□□□ -1.74
RPL39P62891 RNA5SP206-201ENST00000516703 121 ntBASIC4.18□□□□□ -1.74
RPL39P62891 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC4.18□□□□□ -1.74
RPL39P62891 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC4.18□□□□□ -1.74
RPL39P62891 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.18□□□□□ -1.74
RPL39P62891 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.18□□□□□ -1.74
RPL39P62891 AC008055.1-201ENST00000547032 609 ntBASIC4.18□□□□□ -1.74
RPL39P62891 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.18□□□□□ -1.74
RPL39P62891 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.18□□□□□ -1.74
RPL39P62891 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.18□□□□□ -1.74
RPL39P62891 FCGR1CP-201ENST00000579737 1127 ntBASIC4.18□□□□□ -1.74
RPL39P62891 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.18□□□□□ -1.74
RPL39P62891 AC006115.2-201ENST00000596823 202 ntBASIC4.18□□□□□ -1.74
RPL39P62891 AL513327.3-201ENST00000602618 469 ntBASIC4.18□□□□□ -1.74
RPL39P62891 AL353729.2-201ENST00000605859 1249 ntBASIC4.18□□□□□ -1.74
RPL39P62891 SNORA74.4-201ENST00000607595 199 ntBASIC4.18□□□□□ -1.74
RPL39P62891 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC4.18□□□□□ -1.74
RPL39P62891 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.18□□□□□ -1.74
RPL39P62891 AL008582.1-201ENST00000609612 442 ntBASIC4.18□□□□□ -1.74
RPL39P62891 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.18□□□□□ -1.74
RPL39P62891 AC022400.9-201ENST00000623633 273 ntBASIC4.18□□□□□ -1.74
RPL39P62891 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.18□□□□□ -1.74
RPL39P62891 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.18□□□□□ -1.74
RPL39P62891 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.18□□□□□ -1.74
RPL39P62891 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC4.18□□□□□ -1.74
RPL39P62891 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 AC093671.1-201ENST00000624981 2929 ntBASIC4.18□□□□□ -1.74
RPL39P62891 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.18□□□□□ -1.74
RPL39P62891 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 AC119674.1-202ENST00000641333 1860 ntBASIC4.18□□□□□ -1.74
RPL39P62891 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RPL39P62891 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RPL39P62891 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.17□□□□□ -1.74
RPL39P62891 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
RPL39P62891 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RPL39P62891 AC009220.2-201ENST00000489759 1751 ntBASIC4.17□□□□□ -1.74
RPL39P62891 AC009135.2-201ENST00000624136 1768 ntBASIC4.17□□□□□ -1.74
RPL39P62891 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
RPL39P62891 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.17□□□□□ -1.74
RPL39P62891 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RPL39P62891 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.17□□□□□ -1.74
RPL39P62891 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RPL39P62891 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RPL39P62891 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RPL39P62891 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RPL39P62891 AC010894.1-201ENST00000313760 361 ntBASIC4.17□□□□□ -1.74
RPL39P62891 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RPL39P62891 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RPL39P62891 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RPL39P62891 RNU105B-201ENST00000364478 208 ntBASIC4.17□□□□□ -1.74
RPL39P62891 RPL11P3-201ENST00000395256 523 ntBASIC4.17□□□□□ -1.74
RPL39P62891 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.17□□□□□ -1.74
RPL39P62891 RPL21P50-201ENST00000417698 477 ntBASIC4.17□□□□□ -1.74
RPL39P62891 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC4.17□□□□□ -1.74
RPL39P62891 CRIP1P1-201ENST00000427567 185 ntBASIC4.17□□□□□ -1.74
RPL39P62891 AL645939.3-201ENST00000435408 225 ntBASIC4.17□□□□□ -1.74
RPL39P62891 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RPL39P62891 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.17□□□□□ -1.74
RPL39P62891 HIGD1AP16-201ENST00000450986 258 ntBASIC4.17□□□□□ -1.74
RPL39P62891 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.17□□□□□ -1.74
RPL39P62891 AC105391.1-201ENST00000503155 1045 ntBASIC4.17□□□□□ -1.74
RPL39P62891 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms