Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.85□□□□□ -1.47
CDH12P55289 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.85□□□□□ -1.47
CDH12P55289 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.85□□□□□ -1.47
CDH12P55289 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.85□□□□□ -1.47
CDH12P55289 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.85□□□□□ -1.47
CDH12P55289 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.85□□□□□ -1.47
CDH12P55289 AC012175.1-201ENST00000603755 531 ntBASIC5.85□□□□□ -1.47
CDH12P55289 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH12P55289 OR7M1P-201ENST00000608946 533 ntBASIC5.85□□□□□ -1.47
CDH12P55289 MIR6849-201ENST00000618543 69 ntBASIC5.85□□□□□ -1.47
CDH12P55289 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH12P55289 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CDH12P55289 ZNF101P1-201ENST00000435701 1720 ntBASIC5.85□□□□□ -1.47
CDH12P55289 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.85□□□□□ -1.47
CDH12P55289 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH12P55289 CCDC150P1-201ENST00000537123 2215 ntBASIC5.84□□□□□ -1.47
CDH12P55289 AC022306.1-201ENST00000560489 1562 ntBASIC5.84□□□□□ -1.47
CDH12P55289 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH12P55289 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH12P55289 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH12P55289 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
CDH12P55289 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH12P55289 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH12P55289 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH12P55289 TTC41P-205ENST00000551270 3963 ntBASIC5.84□□□□□ -1.47
CDH12P55289 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH12P55289 AL161901.1-201ENST00000624954 3425 ntBASIC5.84□□□□□ -1.47
CDH12P55289 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH12P55289 RNU1-5P-201ENST00000362684 144 ntBASIC5.84□□□□□ -1.47
CDH12P55289 SNORD35A-201ENST00000363389 86 ntBASIC5.84□□□□□ -1.47
CDH12P55289 RNU6-152P-201ENST00000384037 107 ntBASIC5.84□□□□□ -1.47
CDH12P55289 MIR431-201ENST00000385266 114 ntBASIC5.84□□□□□ -1.47
CDH12P55289 RPL23AP17-201ENST00000401064 499 ntBASIC5.84□□□□□ -1.47
CDH12P55289 AL358178.1-201ENST00000407698 397 ntBASIC5.84□□□□□ -1.47
CDH12P55289 RN7SKP281-201ENST00000410472 352 ntBASIC5.84□□□□□ -1.47
CDH12P55289 RN7SKP205-201ENST00000410999 307 ntBASIC5.84□□□□□ -1.47
CDH12P55289 OR52N3P-201ENST00000413417 934 ntBASIC5.84□□□□□ -1.47
CDH12P55289 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH12P55289 AJ239321.1-201ENST00000424255 564 ntBASIC5.84□□□□□ -1.47
CDH12P55289 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH12P55289 AC074367.1-201ENST00000438685 1125 ntBASIC5.84□□□□□ -1.47
CDH12P55289 BX679664.2-201ENST00000439282 283 ntBASIC5.84□□□□□ -1.47
CDH12P55289 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH12P55289 AL606490.8-201ENST00000441624 319 ntBASIC5.84□□□□□ -1.47
CDH12P55289 AL020997.1-201ENST00000446554 349 ntBASIC5.84□□□□□ -1.47
CDH12P55289 VN1R48P-201ENST00000448149 1036 ntBASIC5.84□□□□□ -1.47
CDH12P55289 AL353718.1-201ENST00000451028 517 ntBASIC5.84□□□□□ -1.47
CDH12P55289 AL445687.2-201ENST00000458156 728 ntBASIC5.84□□□□□ -1.47
CDH12P55289 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH12P55289 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH12P55289 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.84□□□□□ -1.47
CDH12P55289 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.84□□□□□ -1.47
CDH12P55289 AC112184.1-201ENST00000505179 312 ntBASIC5.84□□□□□ -1.47
CDH12P55289 AC093870.1-201ENST00000506837 213 ntBASIC5.84□□□□□ -1.47
CDH12P55289 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH12P55289 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH12P55289 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH12P55289 AP003049.1-201ENST00000529418 457 ntBASIC5.84□□□□□ -1.47
CDH12P55289 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CDH12P55289 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH12P55289 AC023080.1-201ENST00000551663 931 ntBASIC5.84□□□□□ -1.47
CDH12P55289 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH12P55289 OR4C49P-201ENST00000563891 900 ntBASIC5.84□□□□□ -1.47
CDH12P55289 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.84□□□□□ -1.47
CDH12P55289 AC004805.3-201ENST00000603178 310 ntBASIC5.84□□□□□ -1.47
CDH12P55289 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.84□□□□□ -1.47
CDH12P55289 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH12P55289 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH12P55289 AC006249.1-201ENST00000621223 471 ntBASIC5.84□□□□□ -1.47
CDH12P55289 AC006453.5-201ENST00000636451 619 ntBASIC5.84□□□□□ -1.47
CDH12P55289 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH12P55289 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CDH12P55289 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH12P55289 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CDH12P55289 AL121768.1-201ENST00000613917 2544 ntBASIC5.84□□□□□ -1.47
CDH12P55289 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CDH12P55289 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CDH12P55289 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.84□□□□□ -1.48
CDH12P55289 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.84□□□□□ -1.48
CDH12P55289 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CDH12P55289 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH12P55289 AC005702.3-201ENST00000585345 1447 ntBASIC5.83□□□□□ -1.48
CDH12P55289 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH12P55289 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH12P55289 CASC19-255ENST00000641733 1385 ntBASIC5.83□□□□□ -1.48
CDH12P55289 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH12P55289 AC010894.1-201ENST00000313760 361 ntBASIC5.83□□□□□ -1.48
CDH12P55289 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CDH12P55289 AC092634.1-201ENST00000366505 199 ntBASIC5.83□□□□□ -1.48
CDH12P55289 SNORA7A-201ENST00000384765 139 ntBASIC5.83□□□□□ -1.48
CDH12P55289 AL050305.1-201ENST00000399993 1230 ntBASIC5.83□□□□□ -1.48
CDH12P55289 AL121835.1-201ENST00000404250 354 ntBASIC5.83□□□□□ -1.48
CDH12P55289 ZNF37CP-201ENST00000406795 241 ntBASIC5.83□□□□□ -1.48
CDH12P55289 MEAF6P1-201ENST00000416092 327 ntBASIC5.83□□□□□ -1.48
CDH12P55289 MTND4LP7-201ENST00000431728 294 ntBASIC5.83□□□□□ -1.48
CDH12P55289 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH12P55289 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH12P55289 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH12P55289 COL11A2P1-205ENST00000441798 676 ntBASIC5.83□□□□□ -1.48
CDH12P55289 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms