Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 VIM2P-201ENST00000402383 1294 ntBASIC5.75□□□□□ -1.49
CDH11P55287 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH11P55287 THEM7P-201ENST00000419556 672 ntBASIC5.75□□□□□ -1.49
CDH11P55287 AC007562.1-201ENST00000421819 517 ntBASIC5.75□□□□□ -1.49
CDH11P55287 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH11P55287 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH11P55287 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH11P55287 AL512637.1-201ENST00000439523 1231 ntBASIC5.75□□□□□ -1.49
CDH11P55287 AC023274.2-201ENST00000445264 521 ntBASIC5.75□□□□□ -1.49
CDH11P55287 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH11P55287 RN7SL168P-201ENST00000463821 279 ntBASIC5.75□□□□□ -1.49
CDH11P55287 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH11P55287 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH11P55287 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH11P55287 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH11P55287 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH11P55287 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.75□□□□□ -1.49
CDH11P55287 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.75□□□□□ -1.49
CDH11P55287 AC009120.3-201ENST00000563335 499 ntBASIC5.75□□□□□ -1.49
CDH11P55287 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH11P55287 AC090651.1-201ENST00000567865 634 ntBASIC5.75□□□□□ -1.49
CDH11P55287 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.75□□□□□ -1.49
CDH11P55287 SNORD96A-201ENST00000606577 79 ntBASIC5.75□□□□□ -1.49
CDH11P55287 uc_338.29-201ENST00000615099 168 ntBASIC5.75□□□□□ -1.49
CDH11P55287 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.75□□□□□ -1.49
CDH11P55287 PPBPP2-201ENST00000513150 1362 ntBASIC5.75□□□□□ -1.49
CDH11P55287 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH11P55287 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH11P55287 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH11P55287 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH11P55287 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CDH11P55287 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH11P55287 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH11P55287 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH11P55287 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH11P55287 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH11P55287 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH11P55287 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH11P55287 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH11P55287 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CDH11P55287 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CDH11P55287 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH11P55287 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH11P55287 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CDH11P55287 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CDH11P55287 PPIAP24-201ENST00000328558 471 ntBASIC5.74□□□□□ -1.49
CDH11P55287 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CDH11P55287 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH11P55287 RNA5SP232-201ENST00000364144 119 ntBASIC5.74□□□□□ -1.49
CDH11P55287 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH11P55287 U3.52-201ENST00000384034 216 ntBASIC5.74□□□□□ -1.49
CDH11P55287 RPL23AP17-201ENST00000401064 499 ntBASIC5.74□□□□□ -1.49
CDH11P55287 RPS26P38-201ENST00000414476 348 ntBASIC5.74□□□□□ -1.49
CDH11P55287 COL11A2P1-205ENST00000441798 676 ntBASIC5.74□□□□□ -1.49
CDH11P55287 RPL7L1P3-201ENST00000455249 689 ntBASIC5.74□□□□□ -1.49
CDH11P55287 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH11P55287 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH11P55287 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH11P55287 RPS27P20-201ENST00000492051 246 ntBASIC5.74□□□□□ -1.49
CDH11P55287 RPL19P11-201ENST00000495944 589 ntBASIC5.74□□□□□ -1.49
CDH11P55287 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH11P55287 AC113398.2-201ENST00000507630 558 ntBASIC5.74□□□□□ -1.49
CDH11P55287 AC147055.1-201ENST00000509261 750 ntBASIC5.74□□□□□ -1.49
CDH11P55287 GUSBP9-201ENST00000510138 584 ntBASIC5.74□□□□□ -1.49
CDH11P55287 MTND2P31-201ENST00000512602 616 ntBASIC5.74□□□□□ -1.49
CDH11P55287 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.74□□□□□ -1.49
CDH11P55287 AC025857.1-201ENST00000525252 377 ntBASIC5.74□□□□□ -1.49
CDH11P55287 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH11P55287 AC024405.1-201ENST00000532521 1042 ntBASIC5.74□□□□□ -1.49
CDH11P55287 OR4A41P-201ENST00000533053 928 ntBASIC5.74□□□□□ -1.49
CDH11P55287 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.74□□□□□ -1.49
CDH11P55287 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH11P55287 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH11P55287 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH11P55287 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH11P55287 SYPL1P2-201ENST00000582878 727 ntBASIC5.74□□□□□ -1.49
CDH11P55287 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH11P55287 AL021368.3-201ENST00000607119 578 ntBASIC5.74□□□□□ -1.49
CDH11P55287 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH11P55287 AL359091.2-201ENST00000609303 556 ntBASIC5.74□□□□□ -1.49
CDH11P55287 MIR7109-201ENST00000613748 65 ntBASIC5.74□□□□□ -1.49
CDH11P55287 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.74□□□□□ -1.49
CDH11P55287 AC012676.3-201ENST00000614983 479 ntBASIC5.74□□□□□ -1.49
CDH11P55287 U1.41-201ENST00000617626 165 ntBASIC5.74□□□□□ -1.49
CDH11P55287 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH11P55287 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH11P55287 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH11P55287 AC092692.1-201ENST00000623625 2595 ntBASIC5.74□□□□□ -1.49
CDH11P55287 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH11P55287 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH11P55287 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH11P55287 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH11P55287 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.74□□□□□ -1.49
CDH11P55287 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH11P55287 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH11P55287 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CDH11P55287 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH11P55287 AP002512.4-202ENST00000641599 4530 ntBASIC5.73□□□□□ -1.49
CDH11P55287 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH11P55287 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms