Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.51□□□□□ -1.37
LHX1P48742 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.51□□□□□ -1.37
LHX1P48742 AC079905.1-201ENST00000549280 475 ntBASIC6.51□□□□□ -1.37
LHX1P48742 AC090888.3-201ENST00000558917 509 ntBASIC6.51□□□□□ -1.37
LHX1P48742 OR4H6P-201ENST00000563771 921 ntBASIC6.51□□□□□ -1.37
LHX1P48742 AC090826.1-203ENST00000569235 490 ntBASIC6.51□□□□□ -1.37
LHX1P48742 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.51□□□□□ -1.37
LHX1P48742 AC090236.2-201ENST00000587933 1101 ntBASIC6.51□□□□□ -1.37
LHX1P48742 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.51□□□□□ -1.37
LHX1P48742 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.51□□□□□ -1.37
LHX1P48742 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.51□□□□□ -1.37
LHX1P48742 AL138895.2-201ENST00000603019 178 ntBASIC6.51□□□□□ -1.37
LHX1P48742 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.51□□□□□ -1.37
LHX1P48742 AC016590.3-201ENST00000611171 753 ntBASIC6.51□□□□□ -1.37
LHX1P48742 AC079414.3-201ENST00000612986 1090 ntBASIC6.51□□□□□ -1.37
LHX1P48742 AC096861.1-201ENST00000616652 240 ntBASIC6.51□□□□□ -1.37
LHX1P48742 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
LHX1P48742 AC129778.1-202ENST00000623812 261 ntBASIC6.51□□□□□ -1.37
LHX1P48742 AL591379.1-207ENST00000635982 261 ntBASIC6.51□□□□□ -1.37
LHX1P48742 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.51□□□□□ -1.37
LHX1P48742 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.51□□□□□ -1.37
LHX1P48742 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LHX1P48742 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
LHX1P48742 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LHX1P48742 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.51□□□□□ -1.37
LHX1P48742 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LHX1P48742 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
LHX1P48742 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
LHX1P48742 AC092646.2-201ENST00000431242 2095 ntBASIC6.51□□□□□ -1.37
LHX1P48742 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LHX1P48742 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LHX1P48742 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
LHX1P48742 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.5□□□□□ -1.37
LHX1P48742 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX1P48742 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
LHX1P48742 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
LHX1P48742 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX1P48742 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX1P48742 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX1P48742 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.5□□□□□ -1.37
LHX1P48742 MIR1282-201ENST00000408865 101 ntBASIC6.5□□□□□ -1.37
LHX1P48742 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.5□□□□□ -1.37
LHX1P48742 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX1P48742 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.5□□□□□ -1.37
LHX1P48742 AC007568.1-201ENST00000422912 471 ntBASIC6.5□□□□□ -1.37
LHX1P48742 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX1P48742 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX1P48742 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.5□□□□□ -1.37
LHX1P48742 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.5□□□□□ -1.37
LHX1P48742 RN7SKP238-201ENST00000516483 249 ntBASIC6.5□□□□□ -1.37
LHX1P48742 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.5□□□□□ -1.37
LHX1P48742 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.5□□□□□ -1.37
LHX1P48742 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.5□□□□□ -1.37
LHX1P48742 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX1P48742 AC005726.4-201ENST00000582858 458 ntBASIC6.5□□□□□ -1.37
LHX1P48742 AC004836.1-201ENST00000623032 634 ntBASIC6.5□□□□□ -1.37
LHX1P48742 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX1P48742 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX1P48742 AP001157.1-201ENST00000550837 2339 ntBASIC6.5□□□□□ -1.37
LHX1P48742 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
LHX1P48742 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.5□□□□□ -1.37
LHX1P48742 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX1P48742 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX1P48742 AL022323.4-201ENST00000623980 13120 ntBASIC6.5□□□□□ -1.37
LHX1P48742 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
LHX1P48742 SHQ1P1-201ENST00000437111 1544 ntBASIC6.5□□□□□ -1.37
LHX1P48742 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
LHX1P48742 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
LHX1P48742 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.49□□□□□ -1.37
LHX1P48742 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 ABCA11P-202ENST00000504019 2110 ntBASIC6.49□□□□□ -1.37
LHX1P48742 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.49□□□□□ -1.37
LHX1P48742 RNA5SP375-201ENST00000362975 119 ntBASIC6.49□□□□□ -1.37
LHX1P48742 LCN1P2-201ENST00000372030 223 ntBASIC6.49□□□□□ -1.37
LHX1P48742 AP003170.5-201ENST00000397185 335 ntBASIC6.49□□□□□ -1.37
LHX1P48742 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.49□□□□□ -1.37
LHX1P48742 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.49□□□□□ -1.37
LHX1P48742 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 AC005077.1-201ENST00000449226 375 ntBASIC6.49□□□□□ -1.37
LHX1P48742 RAB28P2-201ENST00000454299 641 ntBASIC6.49□□□□□ -1.37
LHX1P48742 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 NDUFA5P5-201ENST00000468361 342 ntBASIC6.49□□□□□ -1.37
LHX1P48742 AC114728.1-201ENST00000488289 483 ntBASIC6.49□□□□□ -1.37
LHX1P48742 AC025458.1-201ENST00000506046 166 ntBASIC6.49□□□□□ -1.37
LHX1P48742 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.49□□□□□ -1.37
LHX1P48742 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.49□□□□□ -1.37
LHX1P48742 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.49□□□□□ -1.37
LHX1P48742 OR56A7P-201ENST00000524865 941 ntBASIC6.49□□□□□ -1.37
LHX1P48742 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.49□□□□□ -1.37
LHX1P48742 AC027667.1-201ENST00000545814 304 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms