Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SOX2P48431 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.67□□□□□ -1.5
SOX2P48431 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SOX2P48431 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SOX2P48431 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SOX2P48431 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SOX2P48431 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SOX2P48431 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SOX2P48431 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SOX2P48431 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SOX2P48431 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX2P48431 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.67□□□□□ -1.5
SOX2P48431 NPM1P38-201ENST00000403835 865 ntBASIC5.67□□□□□ -1.5
SOX2P48431 RNA5SP251-201ENST00000410614 137 ntBASIC5.67□□□□□ -1.5
SOX2P48431 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.67□□□□□ -1.5
SOX2P48431 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX2P48431 AL596268.1-201ENST00000427910 1048 ntBASIC5.67□□□□□ -1.5
SOX2P48431 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.67□□□□□ -1.5
SOX2P48431 H3F3BP1-201ENST00000440551 403 ntBASIC5.67□□□□□ -1.5
SOX2P48431 RAB28P3-201ENST00000448325 597 ntBASIC5.67□□□□□ -1.5
SOX2P48431 BUD31P2-201ENST00000449374 300 ntBASIC5.67□□□□□ -1.5
SOX2P48431 TVP23CP1-201ENST00000450317 639 ntBASIC5.67□□□□□ -1.5
SOX2P48431 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX2P48431 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.67□□□□□ -1.5
SOX2P48431 AC236972.4-201ENST00000458091 963 ntBASIC5.67□□□□□ -1.5
SOX2P48431 AC104849.1-201ENST00000462623 405 ntBASIC5.67□□□□□ -1.5
SOX2P48431 RN7SL456P-201ENST00000469290 295 ntBASIC5.67□□□□□ -1.5
SOX2P48431 MARK2P8-201ENST00000476069 952 ntBASIC5.67□□□□□ -1.5
SOX2P48431 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.67□□□□□ -1.5
SOX2P48431 RN7SL776P-201ENST00000493390 268 ntBASIC5.67□□□□□ -1.5
SOX2P48431 AC022206.1-201ENST00000495947 347 ntBASIC5.67□□□□□ -1.5
SOX2P48431 UBE2V1P12-201ENST00000503954 474 ntBASIC5.67□□□□□ -1.5
SOX2P48431 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX2P48431 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX2P48431 OR52H2P-201ENST00000514607 902 ntBASIC5.67□□□□□ -1.5
SOX2P48431 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.67□□□□□ -1.5
SOX2P48431 AC010442.1-201ENST00000515583 816 ntBASIC5.67□□□□□ -1.5
SOX2P48431 RNU6-1334P-201ENST00000516032 105 ntBASIC5.67□□□□□ -1.5
SOX2P48431 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.67□□□□□ -1.5
SOX2P48431 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.67□□□□□ -1.5
SOX2P48431 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.67□□□□□ -1.5
SOX2P48431 AP001804.1-201ENST00000526868 919 ntBASIC5.67□□□□□ -1.5
SOX2P48431 GTF2IP11-201ENST00000526931 420 ntBASIC5.67□□□□□ -1.5
SOX2P48431 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.67□□□□□ -1.5
SOX2P48431 PDCL3P1-201ENST00000534575 734 ntBASIC5.67□□□□□ -1.5
SOX2P48431 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX2P48431 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC5.67□□□□□ -1.5
SOX2P48431 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.67□□□□□ -1.5
SOX2P48431 AC008147.3-201ENST00000548666 354 ntBASIC5.67□□□□□ -1.5
SOX2P48431 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SOX2P48431 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX2P48431 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.67□□□□□ -1.5
SOX2P48431 AC005632.2-201ENST00000564271 828 ntBASIC5.67□□□□□ -1.5
SOX2P48431 AC009712.1-201ENST00000564938 316 ntBASIC5.67□□□□□ -1.5
SOX2P48431 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX2P48431 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.67□□□□□ -1.5
SOX2P48431 ANP32BP1-202ENST00000568553 737 ntBASIC5.67□□□□□ -1.5
SOX2P48431 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.67□□□□□ -1.5
SOX2P48431 AC006116.5-201ENST00000591936 559 ntBASIC5.67□□□□□ -1.5
SOX2P48431 EXOSC3P2-201ENST00000594464 497 ntBASIC5.67□□□□□ -1.5
SOX2P48431 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX2P48431 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX2P48431 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX2P48431 AC116165.3-201ENST00000614524 400 ntBASIC5.67□□□□□ -1.5
SOX2P48431 MRPL57P3-201ENST00000619218 176 ntBASIC5.67□□□□□ -1.5
SOX2P48431 AC005753.1-201ENST00000623837 618 ntBASIC5.67□□□□□ -1.5
SOX2P48431 AC073342.3-201ENST00000624211 193 ntBASIC5.67□□□□□ -1.5
SOX2P48431 AC005858.3-201ENST00000624756 589 ntBASIC5.67□□□□□ -1.5
SOX2P48431 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.67□□□□□ -1.5
SOX2P48431 AC106754.1-201ENST00000562632 1513 ntBASIC5.67□□□□□ -1.5
SOX2P48431 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SOX2P48431 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
SOX2P48431 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SOX2P48431 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SOX2P48431 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SOX2P48431 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SOX2P48431 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SOX2P48431 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SOX2P48431 DNM1P47-203ENST00000571780 12667 ntBASIC5.67□□□□□ -1.5
SOX2P48431 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.67□□□□□ -1.5
SOX2P48431 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SOX2P48431 CDY11P-201ENST00000447168 1651 ntBASIC5.66□□□□□ -1.5
SOX2P48431 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SOX2P48431 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SOX2P48431 AC092724.1-201ENST00000624623 3397 ntBASIC5.66□□□□□ -1.5
SOX2P48431 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.66□□□□□ -1.5
SOX2P48431 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SOX2P48431 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SOX2P48431 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.66□□□□□ -1.5
SOX2P48431 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.66□□□□□ -1.5
SOX2P48431 AKAP17BP-201ENST00000431706 2719 ntBASIC5.66□□□□□ -1.5
SOX2P48431 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SOX2P48431 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.66□□□□□ -1.5
SOX2P48431 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.66□□□□□ -1.5
SOX2P48431 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SOX2P48431 UBBP1-201ENST00000392399 473 ntBASIC5.66□□□□□ -1.5
SOX2P48431 RPS3AP25-201ENST00000411660 793 ntBASIC5.66□□□□□ -1.5
SOX2P48431 AL024507.1-201ENST00000412741 274 ntBASIC5.66□□□□□ -1.5
SOX2P48431 AL662791.3-201ENST00000413771 776 ntBASIC5.66□□□□□ -1.5
SOX2P48431 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms