Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.52□□□□□ -1.21
TM4SF1P30408 AL590763.1-201ENST00000398297 1545 ntBASIC7.52□□□□□ -1.21
TM4SF1P30408 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TM4SF1P30408 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TM4SF1P30408 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
TM4SF1P30408 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TM4SF1P30408 AC020978.8-201ENST00000571975 3022 ntBASIC7.52□□□□□ -1.21
TM4SF1P30408 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.51□□□□□ -1.21
TM4SF1P30408 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.51□□□□□ -1.21
TM4SF1P30408 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.51□□□□□ -1.21
TM4SF1P30408 RNA5SP443-201ENST00000363083 132 ntBASIC7.51□□□□□ -1.21
TM4SF1P30408 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 RNU11-6P-201ENST00000391127 133 ntBASIC7.51□□□□□ -1.21
TM4SF1P30408 OR2AT2P-201ENST00000413438 905 ntBASIC7.51□□□□□ -1.21
TM4SF1P30408 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.51□□□□□ -1.21
TM4SF1P30408 AK4P4-201ENST00000419465 646 ntBASIC7.51□□□□□ -1.21
TM4SF1P30408 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.51□□□□□ -1.21
TM4SF1P30408 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.51□□□□□ -1.21
TM4SF1P30408 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.51□□□□□ -1.21
TM4SF1P30408 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.51□□□□□ -1.21
TM4SF1P30408 NDUFA5P12-201ENST00000503796 343 ntBASIC7.51□□□□□ -1.21
TM4SF1P30408 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.51□□□□□ -1.21
TM4SF1P30408 OR6M2P-201ENST00000529831 871 ntBASIC7.51□□□□□ -1.21
TM4SF1P30408 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.51□□□□□ -1.21
TM4SF1P30408 AC022919.1-201ENST00000624979 626 ntBASIC7.51□□□□□ -1.21
TM4SF1P30408 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
TM4SF1P30408 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.51□□□□□ -1.21
TM4SF1P30408 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.51□□□□□ -1.21
TM4SF1P30408 AC007342.5-201ENST00000571340 2142 ntBASIC7.51□□□□□ -1.21
TM4SF1P30408 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TM4SF1P30408 HCFC2P1-201ENST00000392864 1592 ntBASIC7.5□□□□□ -1.21
TM4SF1P30408 MAPK10-323ENST00000641493 3207 ntBASIC7.5□□□□□ -1.21
TM4SF1P30408 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TM4SF1P30408 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.5□□□□□ -1.21
TM4SF1P30408 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
TM4SF1P30408 HDAC1P2-201ENST00000453661 1398 ntBASIC7.5□□□□□ -1.21
TM4SF1P30408 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TM4SF1P30408 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
TM4SF1P30408 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.5□□□□□ -1.21
TM4SF1P30408 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
TM4SF1P30408 SNORA70-201ENST00000384436 135 ntBASIC7.5□□□□□ -1.21
TM4SF1P30408 OR6E1P-201ENST00000414424 923 ntBASIC7.5□□□□□ -1.21
TM4SF1P30408 HMGB3P24-201ENST00000433260 622 ntBASIC7.5□□□□□ -1.21
TM4SF1P30408 RPS27AP3-201ENST00000453803 454 ntBASIC7.5□□□□□ -1.21
TM4SF1P30408 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC7.5□□□□□ -1.21
TM4SF1P30408 AC008629.2-201ENST00000503783 483 ntBASIC7.5□□□□□ -1.21
TM4SF1P30408 AC109481.1-201ENST00000509173 282 ntBASIC7.5□□□□□ -1.21
TM4SF1P30408 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
TM4SF1P30408 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.5□□□□□ -1.21
TM4SF1P30408 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.5□□□□□ -1.21
TM4SF1P30408 AC119403.2-201ENST00000590960 598 ntBASIC7.5□□□□□ -1.21
TM4SF1P30408 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.5□□□□□ -1.21
TM4SF1P30408 MIR7155-201ENST00000615925 56 ntBASIC7.5□□□□□ -1.21
TM4SF1P30408 AC037198.3-201ENST00000616754 526 ntBASIC7.5□□□□□ -1.21
TM4SF1P30408 AC022726.2-201ENST00000634673 547 ntBASIC7.5□□□□□ -1.21
TM4SF1P30408 AC087565.3-203ENST00000641018 837 ntBASIC7.5□□□□□ -1.21
TM4SF1P30408 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TM4SF1P30408 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
TM4SF1P30408 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TM4SF1P30408 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
TM4SF1P30408 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
TM4SF1P30408 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.5□□□□□ -1.21
TM4SF1P30408 AC089998.1-201ENST00000548575 3141 ntBASIC7.49□□□□□ -1.21
TM4SF1P30408 AL359091.1-201ENST00000449048 1734 ntBASIC7.49□□□□□ -1.21
TM4SF1P30408 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
TM4SF1P30408 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.49□□□□□ -1.21
TM4SF1P30408 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
TM4SF1P30408 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.49□□□□□ -1.21
TM4SF1P30408 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TM4SF1P30408 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TM4SF1P30408 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.49□□□□□ -1.21
TM4SF1P30408 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TM4SF1P30408 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC7.49□□□□□ -1.21
TM4SF1P30408 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TM4SF1P30408 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.49□□□□□ -1.21
TM4SF1P30408 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC7.49□□□□□ -1.21
TM4SF1P30408 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
TM4SF1P30408 AL445928.1-201ENST00000435545 222 ntBASIC7.49□□□□□ -1.21
TM4SF1P30408 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.49□□□□□ -1.21
TM4SF1P30408 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.49□□□□□ -1.21
TM4SF1P30408 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.49□□□□□ -1.21
TM4SF1P30408 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC7.49□□□□□ -1.21
TM4SF1P30408 SNORA26.10-201ENST00000516427 141 ntBASIC7.49□□□□□ -1.21
TM4SF1P30408 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.49□□□□□ -1.21
TM4SF1P30408 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC7.49□□□□□ -1.21
TM4SF1P30408 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms