Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.56□□□□□ -1.04
RXRBP28702 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RXRBP28702 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RXRBP28702 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RXRBP28702 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RXRBP28702 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RXRBP28702 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
RXRBP28702 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RXRBP28702 AC020658.2-201ENST00000559030 4020 ntBASIC8.56□□□□□ -1.04
RXRBP28702 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RXRBP28702 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC8.56□□□□□ -1.04
RXRBP28702 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.56□□□□□ -1.04
RXRBP28702 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RXRBP28702 TMA16P2-201ENST00000413187 601 ntBASIC8.56□□□□□ -1.04
RXRBP28702 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC8.56□□□□□ -1.04
RXRBP28702 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
RXRBP28702 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC8.56□□□□□ -1.04
RXRBP28702 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC8.56□□□□□ -1.04
RXRBP28702 MED28P4-201ENST00000433137 572 ntBASIC8.56□□□□□ -1.04
RXRBP28702 MUPP-201ENST00000438111 566 ntBASIC8.56□□□□□ -1.04
RXRBP28702 KATNBL1P3-201ENST00000443475 909 ntBASIC8.56□□□□□ -1.04
RXRBP28702 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC8.56□□□□□ -1.04
RXRBP28702 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC8.56□□□□□ -1.04
RXRBP28702 AL133445.1-201ENST00000467051 452 ntBASIC8.56□□□□□ -1.04
RXRBP28702 RN7SL643P-201ENST00000471845 291 ntBASIC8.56□□□□□ -1.04
RXRBP28702 AC139272.1-201ENST00000505516 640 ntBASIC8.56□□□□□ -1.04
RXRBP28702 AC131392.1-201ENST00000506490 633 ntBASIC8.56□□□□□ -1.04
RXRBP28702 OR4D12P-201ENST00000509361 911 ntBASIC8.56□□□□□ -1.04
RXRBP28702 SCARNA18.1-201ENST00000516330 83 ntBASIC8.56□□□□□ -1.04
RXRBP28702 RNA5SP434-201ENST00000516647 121 ntBASIC8.56□□□□□ -1.04
RXRBP28702 EIF4A2P3-201ENST00000525903 1055 ntBASIC8.56□□□□□ -1.04
RXRBP28702 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC8.56□□□□□ -1.04
RXRBP28702 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC8.56□□□□□ -1.04
RXRBP28702 AC087894.1-201ENST00000538359 518 ntBASIC8.56□□□□□ -1.04
RXRBP28702 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC8.56□□□□□ -1.04
RXRBP28702 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC8.56□□□□□ -1.04
RXRBP28702 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RXRBP28702 AC079148.1-201ENST00000565944 819 ntBASIC8.56□□□□□ -1.04
RXRBP28702 AC023827.2-201ENST00000566880 1061 ntBASIC8.56□□□□□ -1.04
RXRBP28702 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC8.56□□□□□ -1.04
RXRBP28702 AC013562.2-201ENST00000611632 603 ntBASIC8.56□□□□□ -1.04
RXRBP28702 AC025162.2-201ENST00000619602 560 ntBASIC8.56□□□□□ -1.04
RXRBP28702 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC8.56□□□□□ -1.04
RXRBP28702 AC006453.5-201ENST00000636451 619 ntBASIC8.56□□□□□ -1.04
RXRBP28702 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC8.56□□□□□ -1.04
RXRBP28702 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RXRBP28702 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RXRBP28702 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RXRBP28702 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
RXRBP28702 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.56□□□□□ -1.04
RXRBP28702 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC8.56□□□□□ -1.04
RXRBP28702 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC8.56□□□□□ -1.04
RXRBP28702 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC8.56□□□□□ -1.04
RXRBP28702 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RXRBP28702 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC8.55□□□□□ -1.04
RXRBP28702 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC8.55□□□□□ -1.04
RXRBP28702 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
RXRBP28702 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC8.55□□□□□ -1.04
RXRBP28702 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 AP003972.1-201ENST00000625192 5446 ntBASIC8.55□□□□□ -1.04
RXRBP28702 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
RXRBP28702 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 AL645927.1-201ENST00000396783 406 ntBASIC8.55□□□□□ -1.04
RXRBP28702 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC8.55□□□□□ -1.04
RXRBP28702 AC234771.3-201ENST00000454984 622 ntBASIC8.55□□□□□ -1.04
RXRBP28702 AC004815.1-201ENST00000484185 331 ntBASIC8.55□□□□□ -1.04
RXRBP28702 PFN2-217ENST00000498307 556 ntTSL 4 BASIC8.55□□□□□ -1.04
RXRBP28702 CYCSP22-201ENST00000517555 339 ntBASIC8.55□□□□□ -1.04
RXRBP28702 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC8.55□□□□□ -1.04
RXRBP28702 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC8.55□□□□□ -1.04
RXRBP28702 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC8.55□□□□□ -1.04
RXRBP28702 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC8.55□□□□□ -1.04
RXRBP28702 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.55□□□□□ -1.04
RXRBP28702 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC8.55□□□□□ -1.04
RXRBP28702 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC8.55□□□□□ -1.04
RXRBP28702 AP001160.4-201ENST00000596971 382 ntBASIC8.55□□□□□ -1.04
RXRBP28702 AC119751.7-201ENST00000600494 245 ntBASIC8.55□□□□□ -1.04
RXRBP28702 AL049840.5-201ENST00000602827 552 ntBASIC8.55□□□□□ -1.04
RXRBP28702 MIR6793-201ENST00000612376 63 ntBASIC8.55□□□□□ -1.04
RXRBP28702 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC8.55□□□□□ -1.04
RXRBP28702 AP000943.4-201ENST00000622912 357 ntBASIC8.55□□□□□ -1.04
RXRBP28702 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.55□□□□□ -1.04
RXRBP28702 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
RXRBP28702 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RXRBP28702 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC8.55□□□□□ -1.04
RXRBP28702 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
RXRBP28702 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms