Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HLA-DMBP28068 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC4.71□□□□□ -1.65
HLA-DMBP28068 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HLA-DMBP28068 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
HLA-DMBP28068 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
HLA-DMBP28068 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HLA-DMBP28068 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DMBP28068 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DMBP28068 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DMBP28068 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DMBP28068 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DMBP28068 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 PPBPP2-201ENST00000513150 1362 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DMBP28068 AC107977.1-201ENST00000355745 939 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 OOSP1-201ENST00000398992 1270 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 RPL6P21-201ENST00000418672 846 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 AL139158.1-201ENST00000424719 340 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 AC016908.1-201ENST00000442571 1219 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 EEF1B2P3-201ENST00000447718 678 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 OR52E7P-201ENST00000452394 933 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 AL445687.2-201ENST00000458156 728 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 AL355032.1-201ENST00000472981 438 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 AC008945.1-201ENST00000505144 499 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 AC093816.1-201ENST00000515076 913 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DMBP28068 OR4A41P-201ENST00000533053 928 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 RNU4ATAC-201ENST00000580972 127 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 WBP1LP12-201ENST00000604449 331 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 AC022106.1-201ENST00000612834 766 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 AC012676.3-201ENST00000614983 479 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DMBP28068 AL162377.2-201ENST00000624532 337 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 OR7A1P-202ENST00000641542 1158 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 OR7E91P-202ENST00000642062 1198 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DMBP28068 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DMBP28068 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DMBP28068 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DMBP28068 AL359955.1-201ENST00000455242 3275 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DMBP28068 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DMBP28068 AL136984.1-201ENST00000607611 1893 ntBASIC4.71□□□□□ -1.66
HLA-DMBP28068 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DMBP28068 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DMBP28068 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DMBP28068 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DMBP28068 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DMBP28068 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DMBP28068 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DMBP28068 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DMBP28068 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HLA-DMBP28068 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DMBP28068 ZNF101P1-201ENST00000435701 1720 ntBASIC4.7□□□□□ -1.66
HLA-DMBP28068 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DMBP28068 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HLA-DMBP28068 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DMBP28068 SNORA43.1-201ENST00000364863 140 ntBASIC4.7□□□□□ -1.66
HLA-DMBP28068 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HLA-DMBP28068 PRELID1P1-201ENST00000403549 660 ntBASIC4.7□□□□□ -1.66
HLA-DMBP28068 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DMBP28068 RPS7P14-201ENST00000426405 583 ntBASIC4.7□□□□□ -1.66
HLA-DMBP28068 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.7□□□□□ -1.66
HLA-DMBP28068 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DMBP28068 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DMBP28068 GTF3AP6-201ENST00000432585 986 ntBASIC4.7□□□□□ -1.66
HLA-DMBP28068 AC007383.1-201ENST00000445875 636 ntBASIC4.7□□□□□ -1.66
HLA-DMBP28068 TIMM8BP2-201ENST00000445940 251 ntBASIC4.7□□□□□ -1.66
HLA-DMBP28068 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DMBP28068 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DMBP28068 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DMBP28068 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DMBP28068 RN7SL369P-201ENST00000477138 299 ntBASIC4.7□□□□□ -1.66
HLA-DMBP28068 AC117394.1-201ENST00000477323 567 ntBASIC4.7□□□□□ -1.66
HLA-DMBP28068 AC005017.1-201ENST00000482002 490 ntBASIC4.7□□□□□ -1.66
HLA-DMBP28068 GM2AP2-201ENST00000491764 562 ntBASIC4.7□□□□□ -1.66
HLA-DMBP28068 RN7SL568P-201ENST00000493069 298 ntBASIC4.7□□□□□ -1.66
HLA-DMBP28068 GUSBP9-201ENST00000510138 584 ntBASIC4.7□□□□□ -1.66
HLA-DMBP28068 AC010343.2-201ENST00000510162 224 ntBASIC4.7□□□□□ -1.66
HLA-DMBP28068 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.7□□□□□ -1.66
HLA-DMBP28068 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DMBP28068 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms