Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC8.12□□□□□ -1.11
ERCC3P19447 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ERCC3P19447 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ERCC3P19447 RN7SKP107-201ENST00000364157 290 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 FAM204BP-201ENST00000369171 701 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 SNORD94-201ENST00000386037 137 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 SUMO2P13-201ENST00000403109 272 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 RPLP1P10-201ENST00000413972 339 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 AC023128.2-201ENST00000420880 1223 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC8.12□□□□□ -1.11
ERCC3P19447 SPATA20P1-201ENST00000423089 438 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC8.12□□□□□ -1.11
ERCC3P19447 AC007365.2-201ENST00000428806 458 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC8.12□□□□□ -1.11
ERCC3P19447 PSPC1P2-201ENST00000455130 225 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 OR11I1P-201ENST00000486033 954 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 AC023050.1-201ENST00000498198 304 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 CDH12P2-201ENST00000504393 298 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 PGAM4P2-201ENST00000512491 721 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC8.12□□□□□ -1.11
ERCC3P19447 SCARNA6-201ENST00000515982 265 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 IGLC4-201ENST00000517690 248 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC8.12□□□□□ -1.11
ERCC3P19447 NDUFS5P6-201ENST00000529136 295 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ERCC3P19447 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC8.12□□□□□ -1.11
ERCC3P19447 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC8.12□□□□□ -1.11
ERCC3P19447 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC8.12□□□□□ -1.11
ERCC3P19447 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC8.12□□□□□ -1.11
ERCC3P19447 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC8.12□□□□□ -1.11
ERCC3P19447 AP002345.2-201ENST00000609961 904 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 MRPL57P3-201ENST00000619218 176 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 AC012321.1-201ENST00000561622 1588 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.12□□□□□ -1.11
ERCC3P19447 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC8.12□□□□□ -1.11
ERCC3P19447 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC8.12□□□□□ -1.11
ERCC3P19447 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
ERCC3P19447 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC8.12□□□□□ -1.11
ERCC3P19447 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC8.12□□□□□ -1.11
ERCC3P19447 AC018688.1-201ENST00000636528 1754 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ERCC3P19447 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ERCC3P19447 AC011008.2-201ENST00000624866 3352 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ERCC3P19447 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8.11□□□□□ -1.11
ERCC3P19447 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.11□□□□□ -1.11
ERCC3P19447 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.11□□□□□ -1.11
ERCC3P19447 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ERCC3P19447 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
ERCC3P19447 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ERCC3P19447 AC005614.1-201ENST00000598952 3653 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC8.11□□□□□ -1.11
ERCC3P19447 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
ERCC3P19447 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
ERCC3P19447 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC8.11□□□□□ -1.11
ERCC3P19447 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ERCC3P19447 RNU4-68P-201ENST00000364314 141 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 MTND4P13-201ENST00000402078 1023 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC8.11□□□□□ -1.11
ERCC3P19447 NACAP7-201ENST00000407371 609 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 AC092638.1-201ENST00000411966 1275 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 AC010385.1-201ENST00000412374 256 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.11□□□□□ -1.11
ERCC3P19447 RPL22P18-201ENST00000417197 377 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 MTND4P3-201ENST00000417829 541 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC8.11□□□□□ -1.11
ERCC3P19447 HSPE1P16-201ENST00000426640 348 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 HIGD1AP4-201ENST00000430194 280 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC8.11□□□□□ -1.11
ERCC3P19447 AC015983.1-201ENST00000441577 373 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC8.11□□□□□ -1.11
ERCC3P19447 CCNB1IP1P3-201ENST00000454702 829 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 AL096803.1-201ENST00000456921 1021 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 RN7SKP198-201ENST00000459286 306 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC8.11□□□□□ -1.11
ERCC3P19447 AC087672.1-201ENST00000479876 766 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 AC098583.1-201ENST00000480875 255 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 AC026414.1-201ENST00000504046 698 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC8.11□□□□□ -1.11
ERCC3P19447 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC8.11□□□□□ -1.11
ERCC3P19447 AC024405.1-201ENST00000532521 1042 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.11□□□□□ -1.11
ERCC3P19447 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC8.11□□□□□ -1.11
ERCC3P19447 OR4C49P-201ENST00000563891 900 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
ERCC3P19447 MTND3P13-201ENST00000574391 343 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC8.11□□□□□ -1.11
ERCC3P19447 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
ERCC3P19447 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC8.11□□□□□ -1.11
ERCC3P19447 AL451064.1-201ENST00000607718 471 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 RNU6-84P-201ENST00000607737 102 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 AC108359.1-201ENST00000616451 1211 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 AP004607.9-201ENST00000618202 316 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 AC241377.1-201ENST00000619797 406 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ERCC3P19447 NXF4-202ENST00000416098 1465 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
ERCC3P19447 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ERCC3P19447 MTCO1P18-201ENST00000455518 1419 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms