Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RN7SL126P-201ENST00000616400 299 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 AC105105.5-201ENST00000622635 1294 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 AC104985.3-201ENST00000623479 597 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.8□□□□□ -1.32
COL6A2P12110 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.8□□□□□ -1.32
COL6A2P12110 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.8□□□□□ -1.32
COL6A2P12110 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.8□□□□□ -1.32
COL6A2P12110 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.8□□□□□ -1.32
COL6A2P12110 BX649567.1-201ENST00000642071 1134 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.8□□□□□ -1.32
COL6A2P12110 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.8□□□□□ -1.32
COL6A2P12110 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.8□□□□□ -1.32
COL6A2P12110 AC013488.1-201ENST00000526618 1838 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.8□□□□□ -1.32
COL6A2P12110 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
COL6A2P12110 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL6A2P12110 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
COL6A2P12110 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
COL6A2P12110 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL6A2P12110 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
COL6A2P12110 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL6A2P12110 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL6A2P12110 GOT2P1-201ENST00000440922 1309 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 CIR1P2-201ENST00000514821 1342 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.79□□□□□ -1.32
COL6A2P12110 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL6A2P12110 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
COL6A2P12110 Z97989.1-201ENST00000531702 2421 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL6A2P12110 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL6A2P12110 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COL6A2P12110 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COL6A2P12110 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
COL6A2P12110 MTND5P11-201ENST00000511037 1812 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 AL139384.2-201ENST00000613809 3590 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL6A2P12110 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL6A2P12110 RN7SKP55-201ENST00000364888 307 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 RNU6-796P-201ENST00000391086 107 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 MTND4LP17-201ENST00000414607 293 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 AC023141.1-201ENST00000419418 379 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
COL6A2P12110 USP9YP21-201ENST00000420603 432 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 RBMY2JP-201ENST00000425544 1059 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 DEFB130D-201ENST00000426866 237 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 AC093422.3-201ENST00000428506 305 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 RPL34P27-201ENST00000428810 349 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 MYO5BP3-201ENST00000431872 1279 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COL6A2P12110 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC6.79□□□□□ -1.32
COL6A2P12110 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.79□□□□□ -1.32
COL6A2P12110 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.79□□□□□ -1.32
COL6A2P12110 ZNF886P-201ENST00000450781 723 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 AC092691.2-201ENST00000461787 803 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.79□□□□□ -1.32
COL6A2P12110 AC083806.1-201ENST00000468934 316 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 RN7SL647P-201ENST00000485429 300 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 AC026414.1-201ENST00000504046 698 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 AC021087.2-201ENST00000504656 1203 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 GOLGA5P1-201ENST00000507317 980 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL6A2P12110 NACAP6-201ENST00000509572 622 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 GAPDHP71-201ENST00000511530 1003 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.79□□□□□ -1.32
COL6A2P12110 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.79□□□□□ -1.32
COL6A2P12110 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.79□□□□□ -1.32
COL6A2P12110 OR7E161P-201ENST00000533722 967 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 OR4A40P-201ENST00000533878 948 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.79□□□□□ -1.32
COL6A2P12110 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.79□□□□□ -1.32
COL6A2P12110 AL445383.1-201ENST00000554689 874 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.79□□□□□ -1.32
COL6A2P12110 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
COL6A2P12110 AC004232.1-201ENST00000571388 208 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 AC005951.1-201ENST00000576706 485 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.79□□□□□ -1.32
COL6A2P12110 SIGLEC31P-201ENST00000594237 551 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL6A2P12110 COX6CP16-201ENST00000603667 216 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 AL359704.2-201ENST00000604335 521 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 AC012640.3-201ENST00000607847 430 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.79□□□□□ -1.32
COL6A2P12110 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.79□□□□□ -1.32
COL6A2P12110 VN1R9P-201ENST00000614184 867 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.79□□□□□ -1.32
COL6A2P12110 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.79□□□□□ -1.32
COL6A2P12110 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COL6A2P12110 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.79□□□□□ -1.32
COL6A2P12110 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COL6A2P12110 AC087894.3-201ENST00000623682 349 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms