Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC4.65□□□□□ -1.67
CXCL1P09341 AC009362.1-201ENST00000427253 406 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 AC242426.1-201ENST00000435270 960 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC4.65□□□□□ -1.67
CXCL1P09341 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC4.65□□□□□ -1.67
CXCL1P09341 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC4.65□□□□□ -1.67
CXCL1P09341 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC4.65□□□□□ -1.67
CXCL1P09341 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.65□□□□□ -1.67
CXCL1P09341 RN7SL72P-201ENST00000460697 269 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 AC018475.1-201ENST00000478358 465 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CXCL1P09341 OR9A1P-202ENST00000484361 945 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.65□□□□□ -1.67
CXCL1P09341 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC4.65□□□□□ -1.67
CXCL1P09341 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CXCL1P09341 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC4.65□□□□□ -1.67
CXCL1P09341 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.65□□□□□ -1.67
CXCL1P09341 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.65□□□□□ -1.67
CXCL1P09341 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC4.65□□□□□ -1.67
CXCL1P09341 AC009729.1-201ENST00000548873 1133 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.65□□□□□ -1.67
CXCL1P09341 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC4.65□□□□□ -1.67
CXCL1P09341 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC4.65□□□□□ -1.67
CXCL1P09341 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC4.65□□□□□ -1.67
CXCL1P09341 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC4.65□□□□□ -1.67
CXCL1P09341 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.65□□□□□ -1.67
CXCL1P09341 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.65□□□□□ -1.67
CXCL1P09341 AC006924.1-201ENST00000610750 559 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 AL162574.1-201ENST00000615702 950 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
CXCL1P09341 MIR7159-201ENST00000620587 66 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 AC013489.3-201ENST00000623274 517 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CXCL1P09341 AC073488.9-201ENST00000631601 754 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 FRG1EP-201ENST00000634469 770 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC4.65□□□□□ -1.67
CXCL1P09341 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CXCL1P09341 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CXCL1P09341 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CXCL1P09341 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
CXCL1P09341 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CXCL1P09341 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CXCL1P09341 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.65□□□□□ -1.67
CXCL1P09341 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CXCL1P09341 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CXCL1P09341 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
CXCL1P09341 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CXCL1P09341 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CXCL1P09341 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.65□□□□□ -1.67
CXCL1P09341 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC4.64□□□□□ -1.67
CXCL1P09341 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CXCL1P09341 AL359091.1-201ENST00000449048 1734 ntBASIC4.64□□□□□ -1.67
CXCL1P09341 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
CXCL1P09341 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CXCL1P09341 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CXCL1P09341 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CXCL1P09341 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CXCL1P09341 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CXCL1P09341 AL590635.1-201ENST00000406314 586 ntBASIC4.64□□□□□ -1.67
CXCL1P09341 RN7SKP137-201ENST00000411074 307 ntBASIC4.64□□□□□ -1.67
CXCL1P09341 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CXCL1P09341 AC000089.1-201ENST00000424559 801 ntBASIC4.64□□□□□ -1.67
CXCL1P09341 AHCYP8-201ENST00000425108 209 ntBASIC4.64□□□□□ -1.67
CXCL1P09341 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.64□□□□□ -1.67
CXCL1P09341 RPL14P5-201ENST00000436474 730 ntBASIC4.64□□□□□ -1.67
CXCL1P09341 CR391992.1-201ENST00000438601 394 ntBASIC4.64□□□□□ -1.67
CXCL1P09341 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC4.64□□□□□ -1.67
CXCL1P09341 CBX1P2-201ENST00000453841 458 ntBASIC4.64□□□□□ -1.67
CXCL1P09341 FRG2FP-204ENST00000453982 852 ntBASIC4.64□□□□□ -1.67
CXCL1P09341 PFN2-209ENST00000481275 560 ntTSL 4 BASIC4.64□□□□□ -1.67
CXCL1P09341 AC124945.1-201ENST00000485133 188 ntBASIC4.64□□□□□ -1.67
CXCL1P09341 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC4.64□□□□□ -1.67
CXCL1P09341 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC4.64□□□□□ -1.67
CXCL1P09341 AC093878.1-201ENST00000515630 432 ntBASIC4.64□□□□□ -1.67
CXCL1P09341 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC4.64□□□□□ -1.67
CXCL1P09341 TPM3P3-201ENST00000521343 354 ntBASIC4.64□□□□□ -1.67
CXCL1P09341 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.64□□□□□ -1.67
CXCL1P09341 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC4.64□□□□□ -1.67
CXCL1P09341 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CXCL1P09341 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC4.64□□□□□ -1.67
CXCL1P09341 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.64□□□□□ -1.67
CXCL1P09341 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC4.64□□□□□ -1.67
CXCL1P09341 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC4.64□□□□□ -1.67
CXCL1P09341 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CXCL1P09341 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.64□□□□□ -1.67
CXCL1P09341 AC024085.1-201ENST00000604299 432 ntBASIC4.64□□□□□ -1.67
CXCL1P09341 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC4.64□□□□□ -1.67
CXCL1P09341 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CXCL1P09341 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CXCL1P09341 AL022311.1-201ENST00000623726 19416 ntBASIC4.64□□□□□ -1.67
CXCL1P09341 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
CXCL1P09341 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL1P09341 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL1P09341 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CXCL1P09341 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms