Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC4P09017 CCNT2P1-201ENST00000423082 1315 ntBASIC6.03□□□□□ -1.44
HOXC4P09017 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC4P09017 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC4P09017 GNL2P1-201ENST00000451274 2190 ntBASIC6.03□□□□□ -1.44
HOXC4P09017 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HOXC4P09017 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC4P09017 SNORD8-201ENST00000363915 110 ntBASIC6.03□□□□□ -1.44
HOXC4P09017 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC4P09017 SNORA11.3-201ENST00000408471 128 ntBASIC6.03□□□□□ -1.44
HOXC4P09017 HMGN1P20-201ENST00000411849 300 ntBASIC6.03□□□□□ -1.44
HOXC4P09017 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC4P09017 AC066692.1-201ENST00000421721 457 ntBASIC6.03□□□□□ -1.44
HOXC4P09017 AC245884.2-201ENST00000426257 404 ntBASIC6.03□□□□□ -1.44
HOXC4P09017 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC4P09017 RN7SL221P-201ENST00000466190 281 ntBASIC6.03□□□□□ -1.44
HOXC4P09017 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC4P09017 AC114728.1-201ENST00000488289 483 ntBASIC6.03□□□□□ -1.44
HOXC4P09017 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC4P09017 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC4P09017 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC4P09017 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC4P09017 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC4P09017 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC4P09017 AL136131.3-201ENST00000607600 188 ntBASIC6.03□□□□□ -1.44
HOXC4P09017 AC108673.3-201ENST00000609183 335 ntBASIC6.03□□□□□ -1.44
HOXC4P09017 SNORA11.6-201ENST00000619030 128 ntBASIC6.03□□□□□ -1.44
HOXC4P09017 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC4P09017 NCOA4P2-201ENST00000340589 1813 ntBASIC6.03□□□□□ -1.44
HOXC4P09017 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC4P09017 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC4P09017 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
HOXC4P09017 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HOXC4P09017 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
HOXC4P09017 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC4P09017 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC4P09017 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC4P09017 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HOXC4P09017 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC4P09017 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
HOXC4P09017 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC4P09017 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC4P09017 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC4P09017 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
HOXC4P09017 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC4P09017 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC4P09017 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC4P09017 RBPJP7-201ENST00000442803 1447 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 RBPJP5-201ENST00000449433 1447 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC4P09017 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC4P09017 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC4P09017 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC4P09017 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC4P09017 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HOXC4P09017 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HOXC4P09017 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXC4P09017 AL451142.1-201ENST00000375867 775 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXC4P09017 AL512593.1-201ENST00000444758 779 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.02□□□□□ -1.45
HOXC4P09017 ZNF619P1-201ENST00000446539 752 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 CT45A11P-201ENST00000448043 1134 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 AC103563.5-201ENST00000455643 364 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 CST12P-201ENST00000457644 362 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 RPL12P24-201ENST00000474907 486 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 RN7SKP238-201ENST00000516483 249 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 TRIM51DP-201ENST00000529746 596 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.02□□□□□ -1.45
HOXC4P09017 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.02□□□□□ -1.45
HOXC4P09017 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXC4P09017 AC015982.1-201ENST00000608113 465 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC4P09017 MIR6793-201ENST00000612376 63 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 AL352984.2-202ENST00000613699 155 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 AC021422.1-201ENST00000621212 473 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 AC129915.3-201ENST00000634128 948 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HOXC4P09017 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC4P09017 AC105749.1-201ENST00000631338 2008 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 AC093297.3-201ENST00000607056 2517 ntBASIC6.02□□□□□ -1.45
HOXC4P09017 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC4P09017 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC4P09017 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC4P09017 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HOXC4P09017 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
HOXC4P09017 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC4P09017 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC4P09017 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC4P09017 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC4P09017 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC4P09017 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXC4P09017 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXC4P09017 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HOXC4P09017 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC4P09017 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC4P09017 RNFT1P3-201ENST00000340898 1052 ntBASIC6.01□□□□□ -1.45
HOXC4P09017 RNA5SP477-201ENST00000362639 119 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms