Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 SNX18P12-201ENST00000624821 759 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-DOAP06340 AL157831.2-201ENST00000564681 3095 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-DOAP06340 ZNF969P-201ENST00000510345 2341 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-DOAP06340 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC011416.1-201ENST00000514947 1732 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-DOAP06340 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-DOAP06340 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-DOAP06340 OR11H13P-201ENST00000359695 979 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 MIR433-201ENST00000384837 93 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 MIR323B-201ENST00000385269 82 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC245096.1-201ENST00000413104 546 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC092967.1-201ENST00000449016 481 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 FCF1P7-201ENST00000451185 558 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 HLA-DPA3-207ENST00000454398 229 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 CYCSP53-201ENST00000455540 265 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC018635.1-201ENST00000468292 1030 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 OR5H7P-201ENST00000514084 930 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 RN7SKP157-201ENST00000516174 282 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC067805.1-201ENST00000559344 470 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC090236.2-201ENST00000587933 1101 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC024255.1-201ENST00000614376 102 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC243960.7-201ENST00000623532 707 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC090506.2-201ENST00000624521 419 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 AC022325.1-201ENST00000502748 2199 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-DOAP06340 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.33□□□□□ -1.24
HLA-DOAP06340 RBMY1HP-201ENST00000382759 1389 ntBASIC7.33□□□□□ -1.24
HLA-DOAP06340 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-DOAP06340 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-DOAP06340 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-DOAP06340 RNU2-72P-201ENST00000411175 163 ntBASIC7.32□□□□□ -1.24
HLA-DOAP06340 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 AC097721.1-201ENST00000427150 1253 ntBASIC7.32□□□□□ -1.24
HLA-DOAP06340 TRIM60P16-201ENST00000444048 694 ntBASIC7.32□□□□□ -1.24
HLA-DOAP06340 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 FTLP8-201ENST00000446770 267 ntBASIC7.32□□□□□ -1.24
HLA-DOAP06340 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-DOAP06340 CST12P-201ENST00000457644 362 ntBASIC7.32□□□□□ -1.24
HLA-DOAP06340 ACA64.1-201ENST00000459171 127 ntBASIC7.32□□□□□ -1.24
HLA-DOAP06340 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 AC006499.4-201ENST00000510947 694 ntBASIC7.32□□□□□ -1.24
HLA-DOAP06340 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 AC008555.7-201ENST00000605008 583 ntBASIC7.32□□□□□ -1.24
HLA-DOAP06340 AL513218.1-201ENST00000606527 391 ntBASIC7.32□□□□□ -1.24
HLA-DOAP06340 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.32□□□□□ -1.24
HLA-DOAP06340 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 AC129915.3-201ENST00000634128 948 ntBASIC7.32□□□□□ -1.24
HLA-DOAP06340 AC008691.1-209ENST00000642094 814 ntBASIC7.32□□□□□ -1.24
HLA-DOAP06340 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-DOAP06340 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-DOAP06340 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-DOAP06340 AC022819.1-201ENST00000563495 3910 ntBASIC7.32□□□□□ -1.24
HLA-DOAP06340 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-DOAP06340 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-DOAP06340 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-DOAP06340 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
HLA-DOAP06340 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms