Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL591767.3-201ENST00000554632 525 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.33□□□□□ -1.4
PDGFBP01127 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 FO393422.1-201ENST00000603908 708 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 MIR7155-201ENST00000615925 56 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFBP01127 AC021766.1-201ENST00000624404 741 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFBP01127 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PDGFBP01127 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
PDGFBP01127 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
PDGFBP01127 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PDGFBP01127 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
PDGFBP01127 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.33□□□□□ -1.4
PDGFBP01127 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 AL669831.5-218ENST00000591702 1873 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFBP01127 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFBP01127 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PDGFBP01127 AC008171.1-201ENST00000395058 200 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 IGKV1OR2-3-201ENST00000411475 288 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 AC017078.1-201ENST00000416146 368 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFBP01127 Z68868.1-201ENST00000429048 544 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 AC002504.1-201ENST00000438281 691 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 H2AFZP6-201ENST00000444403 394 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.32□□□□□ -1.4
PDGFBP01127 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFBP01127 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 AL133445.1-201ENST00000467051 452 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 AC074087.1-201ENST00000512059 724 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFBP01127 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFBP01127 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFBP01127 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFBP01127 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFBP01127 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFBP01127 AL137246.2-201ENST00000613439 662 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 AC037198.3-201ENST00000616754 526 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 AL691477.1-201ENST00000624398 162 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 AC022325.1-201ENST00000502748 2199 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFBP01127 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
PDGFBP01127 AL589993.1-201ENST00000407450 2524 ntBASIC6.32□□□□□ -1.4
PDGFBP01127 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFBP01127 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
PDGFBP01127 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 AC005839.1-201ENST00000624148 3213 ntBASIC6.31□□□□□ -1.4
PDGFBP01127 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
PDGFBP01127 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.31□□□□□ -1.4
PDGFBP01127 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PDGFBP01127 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 AC027279.4-201ENST00000624371 2072 ntBASIC6.31□□□□□ -1.4
PDGFBP01127 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFBP01127 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 MIR375-201ENST00000362103 64 ntBASIC6.31□□□□□ -1.4
PDGFBP01127 RNU1-49P-201ENST00000363468 159 ntBASIC6.31□□□□□ -1.4
PDGFBP01127 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
PDGFBP01127 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFBP01127 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.31□□□□□ -1.4
PDGFBP01127 AC091685.2-201ENST00000454924 864 ntBASIC6.31□□□□□ -1.4
PDGFBP01127 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFBP01127 AC108693.1-201ENST00000496068 432 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms