Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 EIF2S2P3-201ENST00000428356 999 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 GAPDHP34-201ENST00000432112 823 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.31□□□□□ -1.4
SMAD6O43541 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.31□□□□□ -1.4
SMAD6O43541 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.31□□□□□ -1.4
SMAD6O43541 AC016908.1-201ENST00000442571 1219 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.31□□□□□ -1.4
SMAD6O43541 RPS26P24-201ENST00000497656 331 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.31□□□□□ -1.4
SMAD6O43541 IGHV1-14-201ENST00000523391 241 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 TOMM20P1-201ENST00000534518 427 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.31□□□□□ -1.4
SMAD6O43541 SNRPGP1-201ENST00000553864 222 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.31□□□□□ -1.4
SMAD6O43541 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.31□□□□□ -1.4
SMAD6O43541 AC009712.1-201ENST00000564938 316 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 AC007346.1-201ENST00000569208 867 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.31□□□□□ -1.4
SMAD6O43541 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SMAD6O43541 AP005901.4-201ENST00000577336 569 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 MIR3189-201ENST00000578735 73 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.31□□□□□ -1.4
SMAD6O43541 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.31□□□□□ -1.4
SMAD6O43541 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.31□□□□□ -1.4
SMAD6O43541 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SMAD6O43541 AC067852.5-201ENST00000589299 310 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 AC073333.2-201ENST00000603589 769 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 AC100814.1-201ENST00000606963 623 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.31□□□□□ -1.4
SMAD6O43541 OR7A1P-202ENST00000641542 1158 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SMAD6O43541 AC011504.1-201ENST00000623331 4103 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
SMAD6O43541 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.31□□□□□ -1.4
SMAD6O43541 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
SMAD6O43541 ZNF402P-201ENST00000404435 3100 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SMAD6O43541 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.31□□□□□ -1.4
SMAD6O43541 USP9YP3-201ENST00000434481 1766 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMAD6O43541 HCFC2P1-201ENST00000392864 1592 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
SMAD6O43541 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMAD6O43541 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMAD6O43541 AP001541.1-201ENST00000623322 1904 ntBASIC6.31□□□□□ -1.4
SMAD6O43541 AC110373.1-201ENST00000505994 3505 ntBASIC6.3□□□□□ -1.4
SMAD6O43541 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SMAD6O43541 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.3□□□□□ -1.4
SMAD6O43541 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SMAD6O43541 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SMAD6O43541 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SMAD6O43541 MTCO1P8-201ENST00000416914 1523 ntBASIC6.3□□□□□ -1.4
SMAD6O43541 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SMAD6O43541 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SMAD6O43541 AC022034.1-201ENST00000512867 2156 ntBASIC6.3□□□□□ -1.4
SMAD6O43541 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SMAD6O43541 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SMAD6O43541 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.3□□□□□ -1.4
SMAD6O43541 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SMAD6O43541 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.3□□□□□ -1.4
SMAD6O43541 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SMAD6O43541 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.3□□□□□ -1.4
SMAD6O43541 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.3□□□□□ -1.4
SMAD6O43541 SNORA43.1-201ENST00000364863 140 ntBASIC6.3□□□□□ -1.4
SMAD6O43541 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.3□□□□□ -1.4
SMAD6O43541 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.3□□□□□ -1.4
SMAD6O43541 IGLV3-4-201ENST00000432300 244 ntBASIC6.3□□□□□ -1.4
SMAD6O43541 TRIM60P13-201ENST00000432350 1283 ntBASIC6.3□□□□□ -1.4
SMAD6O43541 AC069154.1-201ENST00000432914 542 ntBASIC6.3□□□□□ -1.4
SMAD6O43541 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.3□□□□□ -1.4
SMAD6O43541 GAPDHP23-201ENST00000444823 993 ntBASIC6.3□□□□□ -1.4
SMAD6O43541 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.3□□□□□ -1.4
SMAD6O43541 RPL5P10-201ENST00000445207 894 ntBASIC6.3□□□□□ -1.4
SMAD6O43541 PFN1P8-201ENST00000497012 543 ntBASIC6.3□□□□□ -1.4
SMAD6O43541 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SMAD6O43541 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.3□□□□□ -1.4
SMAD6O43541 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.3□□□□□ -1.4
SMAD6O43541 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.3□□□□□ -1.4
SMAD6O43541 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.3□□□□□ -1.4
SMAD6O43541 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SMAD6O43541 AP001437.1-201ENST00000608783 456 ntBASIC6.3□□□□□ -1.4
SMAD6O43541 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.3□□□□□ -1.4
SMAD6O43541 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.3□□□□□ -1.4
SMAD6O43541 AL512652.1-201ENST00000619006 500 ntBASIC6.3□□□□□ -1.4
SMAD6O43541 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SMAD6O43541 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
SMAD6O43541 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.3□□□□□ -1.4
SMAD6O43541 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SMAD6O43541 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SMAD6O43541 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SMAD6O43541 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SMAD6O43541 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SMAD6O43541 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SMAD6O43541 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SMAD6O43541 AC092724.1-201ENST00000624623 3397 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.29□□□□□ -1.4
SMAD6O43541 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SMAD6O43541 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SMAD6O43541 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.29□□□□□ -1.4
SMAD6O43541 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms