Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC006270.3-201ENST00000605967 1036 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 BX649601.1-201ENST00000608264 572 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC008498.1-201ENST00000613012 531 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC025253.1-201ENST00000613623 543 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC016769.4-201ENST00000616893 535 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC024023.1-201ENST00000624530 922 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC073342.2-201ENST00000595842 1800 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AP005901.5-201ENST00000545779 1796 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 Y_RNA.41-201ENST00000362646 102 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 RNU6-694P-201ENST00000364071 147 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 Y_RNA.359-201ENST00000365498 102 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 RPL5P35-201ENST00000398869 816 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 NUS1P4-201ENST00000401550 585 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 RPS3AP24-201ENST00000407896 734 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 RN7SKP232-201ENST00000410170 290 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AL161449.1-201ENST00000414531 1199 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AL139415.2-201ENST00000431968 163 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 ATP5F1P1-201ENST00000433775 569 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 RPS28P8-201ENST00000435020 208 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 RPL23AP76-201ENST00000441860 458 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 GAPDHP28-201ENST00000455134 1003 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 CTSLP6-201ENST00000458273 1002 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 RN7SL36P-201ENST00000469345 276 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 H3F3AP5-201ENST00000475267 429 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC116353.2-201ENST00000505332 712 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC010587.2-201ENST00000511727 448 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 OR5H7P-201ENST00000514084 930 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AP001000.1-201ENST00000526843 742 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AP000662.1-201ENST00000530952 487 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AL139174.1-201ENST00000531489 886 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AP005205.1-201ENST00000563503 508 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 MTCO1P40-201ENST00000574371 625 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC021382.2-201ENST00000584547 922 ntTSL 3 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC020765.1-201ENST00000604296 328 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AC018714.1-201ENST00000605028 208 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AP004247.4-201ENST00000608484 942 ntBASIC6.49□□□□□ -1.37
SHISA3A0PJX4 AL451074.6-201ENST00000608512 729 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms