Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 AC105020.6-201ENST00000621523 1217 ntBASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 AC005332.7-201ENST00000614046 2005 ntBASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDD3Q9Y3P4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDD3Q9Y3P4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDD3Q9Y3P4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDD3Q9Y3P4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDD3Q9Y3P4 HCG11-201ENST00000411553 5696 ntBASIC17.27■□□□□ 0.36
RHBDD3Q9Y3P4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDD3Q9Y3P4 AL512625.2-201ENST00000417533 625 ntBASIC17.27■□□□□ 0.36
RHBDD3Q9Y3P4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDD3Q9Y3P4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDD3Q9Y3P4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDD3Q9Y3P4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDD3Q9Y3P4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDD3Q9Y3P4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDD3Q9Y3P4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDD3Q9Y3P4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDD3Q9Y3P4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 AC026185.1-201ENST00000445748 174 ntBASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 AC133552.2-202ENST00000575694 574 ntBASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 AL050303.2-201ENST00000619798 666 ntBASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDD3Q9Y3P4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 AC093484.2-201ENST00000580996 2166 ntBASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 RAP2CP1-201ENST00000605103 478 ntBASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 AL589743.5-201ENST00000616611 1050 ntBASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 KRT17P1-201ENST00000399211 1546 ntBASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms