Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 AC090192.1-201ENST00000517740 490 ntBASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VTI1BQ9UEU0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
VTI1BQ9UEU0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
VTI1BQ9UEU0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
VTI1BQ9UEU0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.39■□□□□ 0.69
VTI1BQ9UEU0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 CROCCP5-201ENST00000436658 830 ntBASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 AC005181.1-201ENST00000604782 1256 ntBASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VTI1BQ9UEU0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VTI1BQ9UEU0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VTI1BQ9UEU0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
VTI1BQ9UEU0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VTI1BQ9UEU0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VTI1BQ9UEU0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VTI1BQ9UEU0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VTI1BQ9UEU0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VTI1BQ9UEU0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.37■□□□□ 0.69
VTI1BQ9UEU0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.37■□□□□ 0.69
VTI1BQ9UEU0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VTI1BQ9UEU0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.37■□□□□ 0.69
VTI1BQ9UEU0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.37■□□□□ 0.69
VTI1BQ9UEU0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VTI1BQ9UEU0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.36■□□□□ 0.69
VTI1BQ9UEU0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.36■□□□□ 0.69
VTI1BQ9UEU0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VTI1BQ9UEU0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VTI1BQ9UEU0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
VTI1BQ9UEU0 KRT16P6-202ENST00000425692 1426 ntBASIC19.36■□□□□ 0.69
VTI1BQ9UEU0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms