Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 AC087633.2-202ENST00000565166 1439 ntBASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 AC133552.2-202ENST00000575694 574 ntBASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 AL356652.1-201ENST00000615962 565 ntBASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LIN7CQ9NUP9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 RARRES2P4-201ENST00000514074 484 ntBASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 AC005332.7-201ENST00000614046 2005 ntBASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 AC120498.9-201ENST00000339021 3867 ntBASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.38■□□□□ 0.21
LIN7CQ9NUP9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 TREX1-205ENST00000625293 1783 ntBASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.37■□□□□ 0.21
LIN7CQ9NUP9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 AL512625.2-201ENST00000417533 625 ntBASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 AC016405.3-201ENST00000607710 860 ntBASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 AL121832.2-201ENST00000610979 668 ntBASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LIN7CQ9NUP9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms