Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 KRT18P11-201ENST00000435214 1283 ntBASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.59□□□□□ -0.23
CDC42SE2Q9NRR3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDC42SE2Q9NRR3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CDC42SE2Q9NRR3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 RARRES2P4-201ENST00000514074 484 ntBASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 MFSD11-216ENST00000590393 1141 ntBASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 AC105020.6-201ENST00000621523 1217 ntBASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE2Q9NRR3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 KRT18P68-201ENST00000392293 1000 ntBASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 NTF6G-201ENST00000591094 616 ntBASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms