Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.86■■□□□ 1.09
CCDC113Q9H0I3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CCDC113Q9H0I3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.86■■□□□ 1.09
CCDC113Q9H0I3 AC124016.1-201ENST00000609552 612 ntBASIC21.86■■□□□ 1.09
CCDC113Q9H0I3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC113Q9H0I3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC113Q9H0I3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC113Q9H0I3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CCDC113Q9H0I3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.86■■□□□ 1.09
CCDC113Q9H0I3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC113Q9H0I3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC113Q9H0I3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC113Q9H0I3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC113Q9H0I3 GABARAPL3-202ENST00000624044 1851 ntBASIC21.86■■□□□ 1.09
CCDC113Q9H0I3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 AC133681.1-201ENST00000465482 601 ntBASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 AL023875.1-201ENST00000640777 796 ntBASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CCDC113Q9H0I3 AL162377.1-201ENST00000618844 1793 ntBASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 AL512408.1-201ENST00000569378 2000 ntBASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 AC092667.1-201ENST00000434301 2586 ntBASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CCDC113Q9H0I3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 BX119927.1-201ENST00000636596 1552 ntBASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 AL121906.2-201ENST00000621597 723 ntBASIC21.83■■□□□ 1.09
CCDC113Q9H0I3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC113Q9H0I3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC113Q9H0I3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.83■■□□□ 1.08
CCDC113Q9H0I3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 AC239809.2-201ENST00000415381 517 ntBASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CCDC113Q9H0I3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms