Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH11XQ9BZA7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
PCDH11XQ9BZA7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDH11XQ9BZA7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH11XQ9BZA7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
PCDH11XQ9BZA7 HIST1H2APS4-201ENST00000362070 348 ntBASIC25.74■■□□□ 1.71
PCDH11XQ9BZA7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH11XQ9BZA7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH11XQ9BZA7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDH11XQ9BZA7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDH11XQ9BZA7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDH11XQ9BZA7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH11XQ9BZA7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH11XQ9BZA7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH11XQ9BZA7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH11XQ9BZA7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH11XQ9BZA7 AC117947.1-201ENST00000427448 529 ntBASIC25.73■■□□□ 1.71
PCDH11XQ9BZA7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC25.73■■□□□ 1.71
PCDH11XQ9BZA7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH11XQ9BZA7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC25.73■■□□□ 1.71
PCDH11XQ9BZA7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC25.73■■□□□ 1.71
PCDH11XQ9BZA7 LINC01238-205ENST00000567549 1107 ntBASIC25.73■■□□□ 1.71
PCDH11XQ9BZA7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC25.73■■□□□ 1.71
PCDH11XQ9BZA7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH11XQ9BZA7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.73■■□□□ 1.71
PCDH11XQ9BZA7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
PCDH11XQ9BZA7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
PCDH11XQ9BZA7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH11XQ9BZA7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDH11XQ9BZA7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDH11XQ9BZA7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDH11XQ9BZA7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
PCDH11XQ9BZA7 FAM207BP-201ENST00000447172 505 ntBASIC25.72■■□□□ 1.71
PCDH11XQ9BZA7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDH11XQ9BZA7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC25.72■■□□□ 1.71
PCDH11XQ9BZA7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDH11XQ9BZA7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
PCDH11XQ9BZA7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDH11XQ9BZA7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDH11XQ9BZA7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDH11XQ9BZA7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 MYC-208ENST00000641036 567 ntBASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 AC116562.4-202ENST00000641738 218 ntBASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH11XQ9BZA7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PCDH11XQ9BZA7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PCDH11XQ9BZA7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC25.7■■□□□ 1.71
PCDH11XQ9BZA7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.7■■□□□ 1.71
PCDH11XQ9BZA7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PCDH11XQ9BZA7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.71
PCDH11XQ9BZA7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC25.7■■□□□ 1.71
PCDH11XQ9BZA7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC25.7■■□□□ 1.71
PCDH11XQ9BZA7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC25.7■■□□□ 1.71
PCDH11XQ9BZA7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC25.7■■□□□ 1.71
PCDH11XQ9BZA7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC25.7■■□□□ 1.71
PCDH11XQ9BZA7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC25.7■■□□□ 1.71
PCDH11XQ9BZA7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC25.7■■□□□ 1.71
PCDH11XQ9BZA7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC25.7■■□□□ 1.71
PCDH11XQ9BZA7 AL138966.2-201ENST00000621997 464 ntBASIC25.7■■□□□ 1.71
PCDH11XQ9BZA7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDH11XQ9BZA7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PCDH11XQ9BZA7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
PCDH11XQ9BZA7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PCDH11XQ9BZA7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDH11XQ9BZA7 SLC25A1P2-201ENST00000430693 912 ntBASIC25.69■■□□□ 1.7
PCDH11XQ9BZA7 CCR12P-201ENST00000446203 998 ntBASIC25.69■■□□□ 1.7
PCDH11XQ9BZA7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC25.69■■□□□ 1.7
PCDH11XQ9BZA7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
PCDH11XQ9BZA7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDH11XQ9BZA7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDH11XQ9BZA7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDH11XQ9BZA7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDH11XQ9BZA7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDH11XQ9BZA7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH11XQ9BZA7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH11XQ9BZA7 FAM8A6P-201ENST00000407496 1135 ntBASIC25.68■■□□□ 1.7
PCDH11XQ9BZA7 Z85996.1-201ENST00000494644 937 ntBASIC25.68■■□□□ 1.7
PCDH11XQ9BZA7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC25.68■■□□□ 1.7
PCDH11XQ9BZA7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC25.68■■□□□ 1.7
PCDH11XQ9BZA7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH11XQ9BZA7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH11XQ9BZA7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
PCDH11XQ9BZA7 TMEM179-206ENST00000616017 1645 ntBASIC25.68■■□□□ 1.7
PCDH11XQ9BZA7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH11XQ9BZA7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC25.68■■□□□ 1.7
PCDH11XQ9BZA7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC25.68■■□□□ 1.7
PCDH11XQ9BZA7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms