Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 IL9RP2-201ENST00000423948 1312 ntBASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 HBZP1-201ENST00000354915 429 ntBASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 AC005104.2-201ENST00000427818 678 ntBASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LRFN3Q9BTN0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 MIR564-202ENST00000385049 94 ntBASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 BX842568.4-201ENST00000421222 227 ntBASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LRFN3Q9BTN0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRFN3Q9BTN0 KRT18P31-201ENST00000506277 1292 ntBASIC19.83■□□□□ 0.77
LRFN3Q9BTN0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.83■□□□□ 0.77
LRFN3Q9BTN0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
LRFN3Q9BTN0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRFN3Q9BTN0 AL691403.2-201ENST00000618460 490 ntBASIC19.83■□□□□ 0.77
LRFN3Q9BTN0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.83■□□□□ 0.77
LRFN3Q9BTN0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRFN3Q9BTN0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
LRFN3Q9BTN0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.83■□□□□ 0.76
LRFN3Q9BTN0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.83■□□□□ 0.76
LRFN3Q9BTN0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.83■□□□□ 0.76
LRFN3Q9BTN0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.83■□□□□ 0.76
LRFN3Q9BTN0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 HLA-G-202ENST00000376815 851 ntBASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 AP003041.3-201ENST00000527151 707 ntBASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 SLC25A1P1-201ENST00000528351 927 ntBASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.82■□□□□ 0.76
LRFN3Q9BTN0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms