Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 AL356441.2-201ENST00000443009 864 ntBASIC16.99■□□□□ 0.31
CMTM3Q96MX0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 KRT18P20-201ENST00000548986 1279 ntBASIC16.99■□□□□ 0.31
CMTM3Q96MX0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMTM3Q96MX0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 AC120498.9-201ENST00000339021 3867 ntBASIC16.98■□□□□ 0.31
CMTM3Q96MX0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 UNC93B3-201ENST00000308076 687 ntBASIC16.98■□□□□ 0.31
CMTM3Q96MX0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 AC099791.1-201ENST00000416440 715 ntBASIC16.98■□□□□ 0.31
CMTM3Q96MX0 CDV3P1-201ENST00000471403 739 ntBASIC16.98■□□□□ 0.31
CMTM3Q96MX0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 DUX4L2-201ENST00000561772 1275 ntBASIC16.98■□□□□ 0.31
CMTM3Q96MX0 AC027682.1-201ENST00000562846 899 ntBASIC16.98■□□□□ 0.31
CMTM3Q96MX0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 AC008764.7-201ENST00000593779 1081 ntBASIC16.98■□□□□ 0.31
CMTM3Q96MX0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 DUX4L6-201ENST00000626483 1275 ntBASIC16.98■□□□□ 0.31
CMTM3Q96MX0 DUX4L1-201ENST00000627662 1275 ntBASIC16.98■□□□□ 0.31
CMTM3Q96MX0 DUX4L8-201ENST00000629013 1275 ntBASIC16.98■□□□□ 0.31
CMTM3Q96MX0 DUX4L3-201ENST00000630187 1275 ntBASIC16.98■□□□□ 0.31
CMTM3Q96MX0 DUX4L7-201ENST00000630678 1275 ntBASIC16.98■□□□□ 0.31
CMTM3Q96MX0 DUX4L5-201ENST00000630834 1275 ntBASIC16.98■□□□□ 0.31
CMTM3Q96MX0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMTM3Q96MX0 AC090164.3-201ENST00000610780 2143 ntBASIC16.97■□□□□ 0.31
CMTM3Q96MX0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 AC087633.2-202ENST00000565166 1439 ntBASIC16.97■□□□□ 0.31
CMTM3Q96MX0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 AC009113.1-201ENST00000570267 2443 ntBASIC16.97■□□□□ 0.31
CMTM3Q96MX0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 AC006333.2-201ENST00000607957 2099 ntBASIC16.97■□□□□ 0.31
CMTM3Q96MX0 PTBP1P-201ENST00000554374 1601 ntBASIC16.97■□□□□ 0.31
CMTM3Q96MX0 AL161938.1-201ENST00000569833 2180 ntBASIC16.97■□□□□ 0.31
CMTM3Q96MX0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 AC131281.2-201ENST00000520478 145 ntBASIC16.97■□□□□ 0.31
CMTM3Q96MX0 CCDC92B-201ENST00000575506 885 ntBASIC16.97■□□□□ 0.31
CMTM3Q96MX0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CMTM3Q96MX0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.96■□□□□ 0.31
CMTM3Q96MX0 RBM17P2-201ENST00000616397 1405 ntBASIC16.96■□□□□ 0.31
CMTM3Q96MX0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CMTM3Q96MX0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CMTM3Q96MX0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CMTM3Q96MX0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CMTM3Q96MX0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.96■□□□□ 0.31
CMTM3Q96MX0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.96■□□□□ 0.31
CMTM3Q96MX0 AC024257.2-201ENST00000549699 147 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms