Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 AC004951.3-201ENST00000418645 1148 ntBASIC29.64■■■□□ 2.34
CCDC141Q6ZP82 LIN28AP1-201ENST00000429574 405 ntBASIC29.64■■■□□ 2.34
CCDC141Q6ZP82 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC29.64■■■□□ 2.34
CCDC141Q6ZP82 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CCDC141Q6ZP82 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC29.64■■■□□ 2.34
CCDC141Q6ZP82 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC29.64■■■□□ 2.34
CCDC141Q6ZP82 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
CCDC141Q6ZP82 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 HMGA1P5-201ENST00000412453 271 ntBASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 TMEM179-206ENST00000616017 1645 ntBASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC141Q6ZP82 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 ATP5G1P1-201ENST00000448724 379 ntBASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 SLC25A1P4-201ENST00000567977 778 ntBASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC141Q6ZP82 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 AC063952.2-201ENST00000498792 1227 ntBASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 AC087388.1-201ENST00000571370 1112 ntBASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 BX119927.1-201ENST00000636596 1552 ntBASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 GUK1-204ENST00000366721 689 ntTSL 3 BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 AC117947.1-201ENST00000427448 529 ntBASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 FAM207BP-201ENST00000447172 505 ntBASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC141Q6ZP82 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC29.6■■■□□ 2.33
CCDC141Q6ZP82 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC141Q6ZP82 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
CCDC141Q6ZP82 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC141Q6ZP82 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC29.6■■■□□ 2.33
CCDC141Q6ZP82 HIST1H2APS4-201ENST00000362070 348 ntBASIC29.6■■■□□ 2.33
CCDC141Q6ZP82 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC29.6■■■□□ 2.33
CCDC141Q6ZP82 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC141Q6ZP82 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
CCDC141Q6ZP82 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC29.59■■■□□ 2.33
CCDC141Q6ZP82 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC29.59■■■□□ 2.33
CCDC141Q6ZP82 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC29.59■■■□□ 2.33
CCDC141Q6ZP82 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
CCDC141Q6ZP82 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC29.59■■■□□ 2.33
CCDC141Q6ZP82 AC130371.2-201ENST00000619443 611 ntBASIC29.59■■■□□ 2.33
CCDC141Q6ZP82 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC29.59■■■□□ 2.33
CCDC141Q6ZP82 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
CCDC141Q6ZP82 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC141Q6ZP82 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC29.58■■■□□ 2.33
CCDC141Q6ZP82 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC141Q6ZP82 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC29.58■■■□□ 2.33
CCDC141Q6ZP82 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC141Q6ZP82 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC141Q6ZP82 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
CCDC141Q6ZP82 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
CCDC141Q6ZP82 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC141Q6ZP82 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC29.58■■■□□ 2.33
CCDC141Q6ZP82 AL138966.2-201ENST00000621997 464 ntBASIC29.58■■■□□ 2.33
CCDC141Q6ZP82 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC141Q6ZP82 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC29.58■■■□□ 2.33
CCDC141Q6ZP82 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC29.58■■■□□ 2.33
CCDC141Q6ZP82 AC026310.3-201ENST00000625186 2373 ntBASIC29.57■■■□□ 2.32
CCDC141Q6ZP82 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CCDC141Q6ZP82 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
CCDC141Q6ZP82 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
CCDC141Q6ZP82 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC29.57■■■□□ 2.32
CCDC141Q6ZP82 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms