Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HIST2H2AA3Q6FI13 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST2H2AA3Q6FI13 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HIST2H2AA3Q6FI13 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HIST2H2AA3Q6FI13 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST2H2AA3Q6FI13 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST2H2AA3Q6FI13 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST2H2AA3Q6FI13 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.09■□□□□ 0.65
HIST2H2AA3Q6FI13 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST2H2AA3Q6FI13 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST2H2AA3Q6FI13 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIST2H2AA3Q6FI13 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.09■□□□□ 0.65
HIST2H2AA3Q6FI13 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIST2H2AA3Q6FI13 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST2H2AA3Q6FI13 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST2H2AA3Q6FI13 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST2H2AA3Q6FI13 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST2H2AA3Q6FI13 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.08■□□□□ 0.65
HIST2H2AA3Q6FI13 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST2H2AA3Q6FI13 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.08■□□□□ 0.65
HIST2H2AA3Q6FI13 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST2H2AA3Q6FI13 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
HIST2H2AA3Q6FI13 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST2H2AA3Q6FI13 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 MYC-209ENST00000641252 345 ntBASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.08■□□□□ 0.64
HIST2H2AA3Q6FI13 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 AC092368.3-202ENST00000574180 1591 ntBASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 AC069152.1-201ENST00000438030 544 ntBASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 HLA-B-256ENST00000639848 1089 ntBASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.07■□□□□ 0.64
HIST2H2AA3Q6FI13 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST2H2AA3Q6FI13 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST2H2AA3Q6FI13 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIST2H2AA3Q6FI13 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HIST2H2AA3Q6FI13 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HIST2H2AA3Q6FI13 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIST2H2AA3Q6FI13 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST2H2AA3Q6FI13 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST2H2AA3Q6FI13 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIST2H2AA3Q6FI13 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIST2H2AA3Q6FI13 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.05■□□□□ 0.64
HIST2H2AA3Q6FI13 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms