Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Gm37856-201ENSMUST00000191634 999 ntBASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7-2Q5R1I3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Gm12527-201ENSMUST00000117967 564 ntBASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Gm20760-201ENSMUST00000179197 648 ntBASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav7-2Q5R1I3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7-2Q5R1I3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav7-2Q5R1I3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7-2Q5R1I3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav7-2Q5R1I3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7-2Q5R1I3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7-2Q5R1I3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Trav7-2Q5R1I3 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.65□□□□□ -0.38
Trav7-2Q5R1I3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms