Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC26.87■■□□□ 1.89
COL16A1Q07092 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
COL16A1Q07092 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC26.87■■□□□ 1.89
COL16A1Q07092 CA15P1-201ENST00000481698 905 ntBASIC26.87■■□□□ 1.89
COL16A1Q07092 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
COL16A1Q07092 AC104692.2-201ENST00000603054 253 ntBASIC26.87■■□□□ 1.89
COL16A1Q07092 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC26.87■■□□□ 1.89
COL16A1Q07092 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
COL16A1Q07092 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
COL16A1Q07092 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC26.87■■□□□ 1.89
COL16A1Q07092 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
COL16A1Q07092 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL16A1Q07092 PPIH-202ENST00000372549 327 ntTSL 3 BASIC26.87■■□□□ 1.89
COL16A1Q07092 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC26.87■■□□□ 1.89
COL16A1Q07092 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
COL16A1Q07092 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC26.87■■□□□ 1.89
COL16A1Q07092 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC26.87■■□□□ 1.89
COL16A1Q07092 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
COL16A1Q07092 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
COL16A1Q07092 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL16A1Q07092 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL16A1Q07092 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC26.86■■□□□ 1.89
COL16A1Q07092 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL16A1Q07092 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL16A1Q07092 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.86■■□□□ 1.89
COL16A1Q07092 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC26.86■■□□□ 1.89
COL16A1Q07092 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL16A1Q07092 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC26.86■■□□□ 1.89
COL16A1Q07092 AL645929.1-201ENST00000420084 975 ntBASIC26.86■■□□□ 1.89
COL16A1Q07092 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
COL16A1Q07092 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC26.86■■□□□ 1.89
COL16A1Q07092 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC26.86■■□□□ 1.89
COL16A1Q07092 SLC25A6P4-201ENST00000586535 553 ntBASIC26.86■■□□□ 1.89
COL16A1Q07092 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC26.86■■□□□ 1.89
COL16A1Q07092 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL16A1Q07092 AC116351.2-201ENST00000606540 1585 ntBASIC26.85■■□□□ 1.89
COL16A1Q07092 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC26.85■■□□□ 1.89
COL16A1Q07092 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
COL16A1Q07092 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL16A1Q07092 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
COL16A1Q07092 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL16A1Q07092 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL16A1Q07092 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC26.85■■□□□ 1.89
COL16A1Q07092 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
COL16A1Q07092 NT5C-210ENST00000582160 860 ntTSL 2 BASIC26.85■■□□□ 1.89
COL16A1Q07092 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC26.85■■□□□ 1.89
COL16A1Q07092 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
COL16A1Q07092 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.84■■□□□ 1.89
COL16A1Q07092 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
COL16A1Q07092 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC26.84■■□□□ 1.89
COL16A1Q07092 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC26.84■■□□□ 1.89
COL16A1Q07092 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
COL16A1Q07092 AC139530.3-201ENST00000620344 690 ntBASIC26.84■■□□□ 1.89
COL16A1Q07092 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL16A1Q07092 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
COL16A1Q07092 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.84■■□□□ 1.89
COL16A1Q07092 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC26.84■■□□□ 1.89
COL16A1Q07092 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC26.84■■□□□ 1.89
COL16A1Q07092 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL16A1Q07092 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.84■■□□□ 1.89
COL16A1Q07092 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
COL16A1Q07092 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
COL16A1Q07092 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL16A1Q07092 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL16A1Q07092 AP000523.1-201ENST00000398242 1049 ntBASIC26.83■■□□□ 1.89
COL16A1Q07092 EMBP1-201ENST00000458200 901 ntBASIC26.83■■□□□ 1.89
COL16A1Q07092 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC26.83■■□□□ 1.89
COL16A1Q07092 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC26.83■■□□□ 1.89
COL16A1Q07092 AC092329.2-201ENST00000598402 547 ntBASIC26.83■■□□□ 1.89
COL16A1Q07092 AC140113.3-201ENST00000605663 199 ntBASIC26.83■■□□□ 1.89
COL16A1Q07092 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC26.83■■□□□ 1.89
COL16A1Q07092 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
COL16A1Q07092 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL16A1Q07092 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC26.83■■□□□ 1.89
COL16A1Q07092 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
COL16A1Q07092 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL16A1Q07092 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC26.83■■□□□ 1.88
COL16A1Q07092 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC26.83■■□□□ 1.88
COL16A1Q07092 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC26.82■■□□□ 1.88
COL16A1Q07092 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC26.82■■□□□ 1.88
COL16A1Q07092 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC26.82■■□□□ 1.88
COL16A1Q07092 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL16A1Q07092 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC26.82■■□□□ 1.88
COL16A1Q07092 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL16A1Q07092 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.82■■□□□ 1.88
COL16A1Q07092 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL16A1Q07092 Telomerase-vert.1-201ENST00000363312 438 ntBASIC26.82■■□□□ 1.88
COL16A1Q07092 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL16A1Q07092 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC26.82■■□□□ 1.88
COL16A1Q07092 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC26.82■■□□□ 1.88
COL16A1Q07092 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
COL16A1Q07092 TFP1-202ENST00000475455 1573 ntBASIC26.82■■□□□ 1.88
COL16A1Q07092 GOLGA6L3-201ENST00000507199 1679 ntBASIC26.82■■□□□ 1.88
COL16A1Q07092 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL16A1Q07092 HBZP1-201ENST00000354915 429 ntBASIC26.81■■□□□ 1.88
COL16A1Q07092 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL16A1Q07092 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC26.81■■□□□ 1.88
COL16A1Q07092 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
COL16A1Q07092 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL16A1Q07092 NEK4P2-201ENST00000580004 1012 ntBASIC26.81■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms