Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
AP1S1P61966 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.92■□□□□ 0.78
AP1S1P61966 NBPF21P-201ENST00000425093 1451 ntBASIC19.92■□□□□ 0.78
AP1S1P61966 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S1P61966 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S1P61966 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
AP1S1P61966 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S1P61966 TMEM179-206ENST00000616017 1645 ntBASIC19.92■□□□□ 0.78
AP1S1P61966 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S1P61966 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S1P61966 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S1P61966 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
AP1S1P61966 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
AP1S1P61966 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S1P61966 YBX1P10-201ENST00000444752 975 ntBASIC19.92■□□□□ 0.78
AP1S1P61966 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.92■□□□□ 0.78
AP1S1P61966 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.92■□□□□ 0.78
AP1S1P61966 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S1P61966 AC142381.4-202ENST00000563973 229 ntBASIC19.92■□□□□ 0.78
AP1S1P61966 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S1P61966 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S1P61966 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S1P61966 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
AP1S1P61966 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.92■□□□□ 0.78
AP1S1P61966 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
AP1S1P61966 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S1P61966 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
AP1S1P61966 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.91■□□□□ 0.78
AP1S1P61966 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
AP1S1P61966 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
AP1S1P61966 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.91■□□□□ 0.78
AP1S1P61966 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP1S1P61966 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
AP1S1P61966 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP1S1P61966 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP1S1P61966 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP1S1P61966 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
AP1S1P61966 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
AP1S1P61966 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.91■□□□□ 0.78
AP1S1P61966 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.91■□□□□ 0.78
AP1S1P61966 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.91■□□□□ 0.78
AP1S1P61966 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
AP1S1P61966 AC110285.5-201ENST00000611501 352 ntBASIC19.91■□□□□ 0.78
AP1S1P61966 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
AP1S1P61966 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
AP1S1P61966 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.91■□□□□ 0.78
AP1S1P61966 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP1S1P61966 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
AP1S1P61966 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP1S1P61966 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP1S1P61966 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP1S1P61966 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
AP1S1P61966 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S1P61966 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S1P61966 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
AP1S1P61966 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.9■□□□□ 0.78
AP1S1P61966 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S1P61966 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S1P61966 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S1P61966 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S1P61966 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S1P61966 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.9■□□□□ 0.78
AP1S1P61966 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.9■□□□□ 0.78
AP1S1P61966 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
AP1S1P61966 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.9■□□□□ 0.78
AP1S1P61966 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.9■□□□□ 0.78
AP1S1P61966 FAM197Y4-202ENST00000622692 608 ntBASIC19.9■□□□□ 0.78
AP1S1P61966 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.9■□□□□ 0.78
AP1S1P61966 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S1P61966 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
AP1S1P61966 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S1P61966 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.9■□□□□ 0.78
AP1S1P61966 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S1P61966 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S1P61966 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.9■□□□□ 0.78
AP1S1P61966 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.9■□□□□ 0.78
AP1S1P61966 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S1P61966 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S1P61966 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
AP1S1P61966 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S1P61966 AC112907.3-201ENST00000577781 2400 ntBASIC19.9■□□□□ 0.78
AP1S1P61966 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
AP1S1P61966 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
AP1S1P61966 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP1S1P61966 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
AP1S1P61966 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
AP1S1P61966 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.89■□□□□ 0.77
AP1S1P61966 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP1S1P61966 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
AP1S1P61966 AL158047.1-201ENST00000445918 881 ntBASIC19.89■□□□□ 0.77
AP1S1P61966 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
AP1S1P61966 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.89■□□□□ 0.77
AP1S1P61966 AC004264.1-201ENST00000608354 794 ntBASIC19.89■□□□□ 0.77
AP1S1P61966 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP1S1P61966 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP1S1P61966 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP1S1P61966 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
AP1S1P61966 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.88■□□□□ 0.77
AP1S1P61966 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP1S1P61966 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms