Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
UPK1BO75841 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.23■□□□□ 0.35
UPK1BO75841 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.23■□□□□ 0.35
UPK1BO75841 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.23■□□□□ 0.35
UPK1BO75841 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK1BO75841 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK1BO75841 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK1BO75841 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK1BO75841 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.23■□□□□ 0.35
UPK1BO75841 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK1BO75841 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK1BO75841 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK1BO75841 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
UPK1BO75841 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UPK1BO75841 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
UPK1BO75841 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
UPK1BO75841 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPK1BO75841 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
UPK1BO75841 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPK1BO75841 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPK1BO75841 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
UPK1BO75841 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.22■□□□□ 0.35
UPK1BO75841 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
UPK1BO75841 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPK1BO75841 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPK1BO75841 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UPK1BO75841 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.22■□□□□ 0.35
UPK1BO75841 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.22■□□□□ 0.35
UPK1BO75841 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.22■□□□□ 0.35
UPK1BO75841 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.22■□□□□ 0.35
UPK1BO75841 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPK1BO75841 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UPK1BO75841 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UPK1BO75841 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.22■□□□□ 0.35
UPK1BO75841 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPK1BO75841 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPK1BO75841 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.22■□□□□ 0.35
UPK1BO75841 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPK1BO75841 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.21■□□□□ 0.35
UPK1BO75841 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
UPK1BO75841 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UPK1BO75841 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.21■□□□□ 0.35
UPK1BO75841 AC006455.2-201ENST00000429931 906 ntBASIC17.21■□□□□ 0.35
UPK1BO75841 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.21■□□□□ 0.35
UPK1BO75841 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.21■□□□□ 0.35
UPK1BO75841 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
UPK1BO75841 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
UPK1BO75841 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.21■□□□□ 0.35
UPK1BO75841 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPK1BO75841 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
UPK1BO75841 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
UPK1BO75841 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
UPK1BO75841 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
UPK1BO75841 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.2■□□□□ 0.34
UPK1BO75841 Z98044.1-201ENST00000632503 1764 ntBASIC17.2■□□□□ 0.34
UPK1BO75841 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.2■□□□□ 0.34
UPK1BO75841 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.2■□□□□ 0.34
UPK1BO75841 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
UPK1BO75841 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.2■□□□□ 0.34
UPK1BO75841 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
UPK1BO75841 TNRC18P3-201ENST00000441896 2691 ntBASIC17.2■□□□□ 0.34
UPK1BO75841 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
UPK1BO75841 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
UPK1BO75841 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.2■□□□□ 0.34
UPK1BO75841 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.2■□□□□ 0.34
UPK1BO75841 BHLHE23-202ENST00000612929 1109 ntBASIC17.2■□□□□ 0.34
UPK1BO75841 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
UPK1BO75841 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.2■□□□□ 0.34
UPK1BO75841 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
UPK1BO75841 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
UPK1BO75841 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
UPK1BO75841 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms